Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   QL280_RS04275 Genome accession   NZ_CP125291
Coordinates   845662..846312 (+) Length   216 a.a.
NCBI ID   WP_000387332.1    Uniprot ID   A0A6I3U9C7
Organism   Streptococcus pneumoniae strain 105_Kz     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 840662..851312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL280_RS04245 (QL280_04245) - 841145..841360 (+) 216 WP_001232082.1 YozE family protein -
  QL280_RS04250 (QL280_04250) - 841446..842414 (+) 969 WP_000658183.1 PhoH family protein -
  QL280_RS04255 (QL280_04255) - 842607..843107 (+) 501 WP_000566988.1 GNAT family N-acetyltransferase -
  QL280_RS04260 (QL280_04260) - 843110..843436 (+) 327 Protein_840 TfoX/Sxy family protein -
  QL280_RS04265 (QL280_04265) ald 843737..844848 (-) 1112 Protein_841 alanine dehydrogenase -
  QL280_RS04270 (QL280_04270) - 845025..845594 (+) 570 WP_000443775.1 GNAT family N-acetyltransferase -
  QL280_RS04275 (QL280_04275) comEA/celA/cilE 845662..846312 (+) 651 WP_000387332.1 helix-hairpin-helix domain-containing protein Machinery gene
  QL280_RS04280 (QL280_04280) comEC/celB 846296..848536 (+) 2241 WP_282959436.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  QL280_RS10470 - 848685..848902 (+) 218 Protein_845 hypothetical protein -
  QL280_RS04285 (QL280_04285) - 848935..849522 (+) 588 WP_000939880.1 ABC transporter ATP-binding protein -
  QL280_RS04290 (QL280_04290) - 849526..850707 (+) 1182 WP_282959437.1 hypothetical protein -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23219.57 Da        Isoelectric Point: 5.5171

>NTDB_id=830813 QL280_RS04275 WP_000387332.1 845662..846312(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain 105_Kz]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGSGTASSTSKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSIDELKKVSGIGAKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=830813 QL280_RS04275 WP_000387332.1 845662..846312(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain 105_Kz]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGCGGATT
TTTCCTGCTAAAGCCAGCTCCACAAACACCTGTAAAGGAAACGAATTTGCAGGCTGAAGTTGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAGAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGTCAACAGACTGGTTCGGGGACAGCTTCTTCAACAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAGCTTAAACAGGTTAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATAGACCATCGTGAGGCAAATGG
GAAATTCAAGTCGATTGATGAACTCAAGAAGGTCTCTGGCATTGGTGCTAAGACCATAGAAAAGCTAAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(151-214)

(76-126)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I3U9C7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae Rx1

98.148

100

0.981

  comEA/celA/cilE Streptococcus pneumoniae D39

98.148

100

0.981

  comEA/celA/cilE Streptococcus pneumoniae R6

98.148

100

0.981

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

97.222

100

0.972

  comEA/celA/cilE Streptococcus mitis NCTC 12261

96.759

100

0.968

  comEA/celA/cilE Streptococcus mitis SK321

91.204

100

0.912

  comEA Lactococcus lactis subsp. cremoris KW2

44.053

100

0.463

  comEA Latilactobacillus sakei subsp. sakei 23K

34.335

100

0.37

  comEA Bacillus subtilis subsp. subtilis str. 168

42.105

87.963

0.37