Detailed information NTG0082904

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: H7677_RS07045
• Genome accession: NZ_AP023391
• Coordinates: 1443830..1444420 (-)
• Length: 196 a.a.
• NCBI ID: WP_184493223.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DAT299
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1438830..1449420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7677_RS07020 (DAT299_13460)	-	1439313..1440077 (-)	765	WP_184493221.1	ABC transporter ATP-binding protein	-
H7677_RS07025 (DAT299_13470)	-	1440077..1441024 (-)	948	WP_002937293.1	branched-chain amino acid ABC transporter permease	-
H7677_RS07030 (DAT299_13480)	-	1441027..1441914 (-)	888	WP_004298925.1	branched-chain amino acid ABC transporter permease	-
H7677_RS07035 (DAT299_13490)	-	1442130..1443299 (-)	1170	WP_136671173.1	ABC transporter substrate-binding protein	-
H7677_RS07040 (DAT299_13500)	-	1443431..1443703 (-)	273	WP_024381609.1	YlbG family protein	-
H7677_RS07045 (DAT299_13510)	clpP	1443830..1444420 (-)	591	WP_184493223.1	ATP-dependent Clp protease proteolytic subunit	Regulator
H7677_RS07050 (DAT299_13520)	upp	1444543..1445172 (-)	630	WP_012027487.1	uracil phosphoribosyltransferase	-
H7677_RS07055 (DAT299_13530)	-	1445252..1446868 (-)	1617	WP_184493224.1	glycoside hydrolase family 13 protein	-
H7677_RS07060 (DAT299_13550)	-	1447143..1448303 (-)	1161	WP_184493226.1	MalY/PatB family protein	-
H7677_RS07065 (DAT299_13560)	-	1448307..1449398 (-)	1092	WP_184493228.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21522.79 Da
• Isoelectric Point: 5.7110

>NTDB_id=82904 H7677_RS07045 WP_184493223.1 1443830..1444420(-) (clpP) [Streptococcus suis strain DAT299]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGTAASMGTIIASSGVKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKILADNSGK
TVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKVK

Nucleotide

• Length: 591 bp

>NTDB_id=82904 H7677_RS07045 WP_184493223.1 1443830..1444420(-) (clpP) [Streptococcus suis strain DAT299]
ATGATTCCAGTAGTTATTGAACAAACTAGCCGTGGTGAGCGCTCGTATGATATTTATTCCCGTTTGCTCAAGGATCGCAT
TATCATGTTGACAGGACCAGTTGAGGACAATATGGCTAATTCGATTATTGCACAATTGCTTTTCCTTGATGCCCAAGATC
CTACAAAGGATATTTACCTCTATGTTAATACGCCAGGAGGATCGGTGTCAGCAGGTCTTGCCATTGTAGACACGATGAAT
TTCATTAAAGCTGATGTTCAAACCATCGTTATGGGAACAGCTGCGAGCATGGGAACCATCATTGCATCAAGCGGTGTCAA
GGGCAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCGATGGGTGGAACAGGTGGTGGCACTCAGCAAA
CAGACATGGCTATTGCAGCAGAACACCTATTGAAAACACGTAATAAGCTAGAAAAAATCTTGGCAGATAATTCAGGTAAG
ACAGTCAAGCAAATCCATAAGGATGCAGAACGTGATTACTGGATGTCAGCAGAAGAAACCTTGGCTTACGGATTTATTGA
CCAGATTATGGACAATACAAAAGTCAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	92.347	100	0.923
clpP	Streptococcus pyogenes MGAS315	92.347	100	0.923
clpP	Streptococcus mutans UA159	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	88.776	100	0.888
clpP	Streptococcus thermophilus LMG 18311	88.776	100	0.888
clpP	Streptococcus pneumoniae R6	88.265	100	0.883
clpP	Streptococcus pneumoniae Rx1	88.265	100	0.883
clpP	Streptococcus pneumoniae D39	88.265	100	0.883
clpP	Streptococcus pneumoniae TIGR4	88.265	100	0.883
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	84.184	100	0.842
clpP	Lactococcus lactis subsp. cremoris KW2	83.673	100	0.837
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	100	0.582
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571