Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   H7675_RS07700 Genome accession   NZ_AP023389
Coordinates   1539390..1539941 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain KUN-0012590     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1534390..1544941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7675_RS07665 (KUN2590_14690) - 1534394..1535137 (-) 744 WP_184004662.1 class I SAM-dependent DNA methyltransferase -
  H7675_RS07670 (KUN2590_14700) rsfS 1535185..1535538 (-) 354 WP_011017339.1 ribosome silencing factor -
  H7675_RS07675 (KUN2590_14710) yqeK 1535562..1536155 (-) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  H7675_RS07680 (KUN2590_14720) - 1536152..1536784 (-) 633 WP_031488555.1 nicotinate-nucleotide adenylyltransferase -
  H7675_RS07685 (KUN2590_14730) yhbY 1536853..1537161 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  H7675_RS07690 (KUN2590_14740) yqeH 1537186..1538304 (-) 1119 WP_031488554.1 ribosome biogenesis GTPase YqeH -
  H7675_RS07695 (KUN2590_14750) - 1538304..1538831 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  H7675_RS07700 (KUN2590_14760) comX/sigX/comX2/sigX2 1539390..1539941 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=82805 H7675_RS07700 WP_010921894.1 1539390..1539941(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain KUN-0012590]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=82805 H7675_RS07700 WP_010921894.1 1539390..1539941(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain KUN-0012590]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.