Detailed information NTG0826308

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QJV49_RS00935
• Genome accession: NZ_CP124538
• Coordinates: 191108..191956 (+)
• Length: 282 a.a.
• NCBI ID: WP_225511393.1
• Uniprot ID: -
• Organism: Lactococcus sp. NH2-7C
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 186108..196956

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QJV49_RS00910 (QJV49_00910)	ilvN	186865..187341 (+)	477	WP_225511389.1	acetolactate synthase small subunit	-
QJV49_RS00915 (QJV49_00915)	ilvC	187387..188409 (+)	1023	WP_225511390.1	ketol-acid reductoisomerase	-
QJV49_RS00920 (QJV49_00920)	ilvA	188465..189715 (+)	1251	WP_225511391.1	threonine ammonia-lyase IlvA	-
QJV49_RS00925 (QJV49_00925)	budA	189831..190541 (+)	711	WP_057720838.1	acetolactate decarboxylase	-
QJV49_RS00930 (QJV49_00930)	-	190582..190962 (+)	381	WP_225511392.1	RidA family protein	-
QJV49_RS00935 (QJV49_00935)	dprA	191108..191956 (+)	849	WP_225511393.1	DNA-processing protein DprA	Machinery gene
QJV49_RS00940 (QJV49_00940)	topA	192211..194343 (+)	2133	WP_225511394.1	type I DNA topoisomerase	-
QJV49_RS00945 (QJV49_00945)	trmFO	194415..195758 (+)	1344	WP_225511395.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
QJV49_RS00950 (QJV49_00950)	xerS	195810..196880 (-)	1071	WP_225511396.1	tyrosine recombinase XerS	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 32105.27 Da
• Isoelectric Point: 9.6932

>NTDB_id=826308 QJV49_RS00935 WP_225511393.1 191108..191956(+) (dprA) [Lactococcus sp. NH2-7C]
MITNFDLYRWKKAGMTNLGVNKLLKFFHRYDKKISLRQMGQVAQLKSIPNFIEQYKNQDVSKLREEYKIYPSFSLLDEIY
PERLKEIYNPPVLLFYQGDIKLLKTPKLAFVGSRQASSQGIKAVQKIVTELNQKFTIVSGLAKGIDTASHLSAIKNKIPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLILSEYSVGEKPLRYHFPERNRIIAGLSHGVVVIEAKLRSGSLITCERALEEG
RDIFAVPGNIADGFSDGCNHLIQQGAKLIYKAQDILEEYLYD

Nucleotide

• Length: 849 bp

>NTDB_id=826308 QJV49_RS00935 WP_225511393.1 191108..191956(+) (dprA) [Lactococcus sp. NH2-7C]
ATGATAACAAATTTTGATTTATATCGTTGGAAAAAAGCTGGTATGACCAATTTAGGAGTAAATAAACTTTTAAAATTTTT
TCATAGATATGATAAAAAAATAAGTTTAAGACAAATGGGACAAGTAGCACAACTTAAATCAATCCCCAACTTCATTGAGC
AATATAAAAATCAAGACGTAAGTAAACTGAGAGAAGAGTATAAAATATACCCATCATTTTCTCTTCTTGATGAAATTTAT
CCCGAAAGGCTCAAGGAAATTTACAATCCACCCGTTCTGTTATTTTATCAAGGTGATATAAAACTCTTAAAAACCCCTAA
ACTAGCCTTTGTTGGTAGTCGACAAGCTAGTTCACAAGGAATTAAAGCCGTTCAAAAAATTGTGACAGAGTTGAACCAAA
AGTTTACGATCGTCAGCGGACTCGCTAAAGGAATTGACACAGCAAGTCATCTTTCTGCTATTAAAAATAAAATTCCTACA
ATCGCAGTTATTGGTACGGGCTTAGATATCTTTTATCCTTTAGAAAATCGAAAAATTCAAGAATATCTTGCTAAAAACCA
ACTAATTCTATCAGAATATTCAGTCGGAGAAAAACCACTTCGCTATCACTTTCCTGAACGCAATCGTATCATTGCGGGAC
TTTCACATGGCGTAGTAGTGATAGAAGCAAAGTTACGGAGCGGTAGTTTAATTACTTGTGAACGCGCTCTGGAAGAAGGA
AGGGATATCTTCGCTGTACCAGGGAACATAGCAGATGGTTTTTCAGATGGCTGTAATCATCTAATTCAACAAGGAGCAAA
ATTAATCTACAAAGCCCAAGATATCTTAGAAGAATATTTGTATGATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (76-270)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	86.525	100	0.865
dprA	Streptococcus mutans UA159	60.072	98.582	0.592
dprA/cilB/dalA	Streptococcus mitis SK321	54.643	99.291	0.543
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.929	99.291	0.535
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.929	99.291	0.535
dprA	Legionella pneumophila strain ERS1305867	39.13	97.872	0.383
dprA	Haemophilus influenzae Rd KW20	38.889	95.745	0.372
dprA	Bacillus subtilis subsp. subtilis str. 168	44.206	82.624	0.365