Detailed information NTG0823639

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QE150_RS02280
• Genome accession: NZ_CP123993
• Coordinates: 311895..312953 (+)
• Length: 352 a.a.
• NCBI ID: WP_270901098.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Ab4294
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 306895..317953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QE150_RS02265 (QE150_02265)	-	308001..308333 (+)	333	WP_000169602.1	hypothetical protein	-
QE150_RS02270 (QE150_02270)	-	308336..309160 (+)	825	WP_270901099.1	putative RNA methyltransferase	-
QE150_RS02275 (QE150_02275)	ponA	309178..311733 (-)	2556	WP_078209215.1	penicillin-binding protein PBP1a	-
QE150_RS02280 (QE150_02280)	pilM	311895..312953 (+)	1059	WP_270901098.1	pilus assembly protein PilM	Machinery gene
QE150_RS02285 (QE150_02285)	pilN	312953..313594 (+)	642	WP_270901097.1	PilN domain-containing protein	Machinery gene
QE150_RS02290 (QE150_02290)	pilO	313591..314331 (+)	741	WP_000076102.1	type 4a pilus biogenesis protein PilO	Machinery gene
QE150_RS02295 (QE150_02295)	pilP	314342..314869 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
QE150_RS02300 (QE150_02300)	pilQ	314932..317097 (+)	2166	WP_270901096.1	type IV pilus secretin PilQ	Machinery gene
QE150_RS02305 (QE150_02305)	aroK	317109..317678 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39002.56 Da
• Isoelectric Point: 4.4618

>NTDB_id=823639 QE150_RS02280 WP_270901098.1 311895..312953(+) (pilM) [Acinetobacter baumannii strain Ab4294]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRGFD

Nucleotide

• Length: 1059 bp

>NTDB_id=823639 QE150_RS02280 WP_270901098.1 311895..312953(+) (pilM) [Acinetobacter baumannii strain Ab4294]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGGGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.45	99.716	0.423