Detailed information NTG0823504

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QEP20_RS17705
• Genome accession: NZ_CP123977
• Coordinates: 3410538..3411131 (+)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis subsp. subtilis strain WH60A
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3405538..3416131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QEP20_RS17675 (QEP20_17675)	psmA	3405793..3406128 (+)	336	WP_014480966.1	SMR family transporter	-
QEP20_RS17680 (QEP20_17680)	psmB	3406128..3406448 (+)	321	WP_003228222.1	QacE family quaternary ammonium compound efflux SMR transporter	-
QEP20_RS17685 (QEP20_17685)	yvdQ	3406484..3406996 (-)	513	WP_003243249.1	DUF3231 family protein	-
QEP20_RS17690 (QEP20_17690)	cotNP	3407248..3408591 (-)	1344	WP_003228217.1	FAD-binding oxidoreductase	-
QEP20_RS17695 (QEP20_17695)	cotR	3408947..3409909 (+)	963	WP_015251166.1	sporulation hydrolase CotR	-
QEP20_RS17705 (QEP20_17705)	clpP	3410538..3411131 (+)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
QEP20_RS17710 (QEP20_17710)	pgmB	3411177..3411857 (-)	681	WP_029318355.1	beta-phosphoglucomutase	-
QEP20_RS17715 (QEP20_17715)	malL	3411854..3413539 (-)	1686	WP_029318354.1	oligo-1,6-glucosidase	-
QEP20_RS17720 (QEP20_17720)	mdxK	3413532..3415805 (-)	2274	WP_029318353.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=823504 QEP20_RS17705 WP_003228214.1 3410538..3411131(+) (clpP) [Bacillus subtilis subsp. subtilis strain WH60A]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=823504 QEP20_RS17705 WP_003228214.1 3410538..3411131(+) (clpP) [Bacillus subtilis subsp. subtilis strain WH60A]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGATAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538