Detailed information NTG0822595

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QFB56_RS01680
• Genome accession: NZ_CP123765
• Coordinates: 348356..349414 (+)
• Length: 352 a.a.
• NCBI ID: WP_005067078.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AP8900
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 343356..354414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QFB56_RS01665 (QFB56_01665)	-	344458..344790 (+)	333	WP_002116981.1	hypothetical protein	-
QFB56_RS01670 (QFB56_01670)	rrmA	344793..345617 (+)	825	WP_080777164.1	putative RNA methyltransferase	-
QFB56_RS01675 (QFB56_01675)	ponA	345633..348194 (-)	2562	WP_032057246.1	penicillin-binding protein PBP1a	-
QFB56_RS01680 (QFB56_01680)	pilM	348356..349414 (+)	1059	WP_005067078.1	pilus assembly protein PilM	Machinery gene
QFB56_RS01685 (QFB56_01685)	pilN	349414..350055 (+)	642	WP_002116944.1	PilN domain-containing protein	Machinery gene
QFB56_RS01690 (QFB56_01690)	pilO	350052..350831 (+)	780	WP_032057248.1	type 4a pilus biogenesis protein PilO	Machinery gene
QFB56_RS01695 (QFB56_01695)	pilP	350843..351370 (+)	528	WP_005067086.1	pilus assembly protein PilP	Machinery gene
QFB56_RS01700 (QFB56_01700)	pilQ	351433..353598 (+)	2166	WP_032063183.1	type IV pilus secretin PilQ	Machinery gene
QFB56_RS01705 (QFB56_01705)	aroK	353610..354179 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39068.65 Da
• Isoelectric Point: 4.4657

>NTDB_id=822595 QFB56_RS01680 WP_005067078.1 348356..349414(+) (pilM) [Acinetobacter pittii strain AP8900]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=822595 QFB56_RS01680 WP_005067078.1 348356..349414(+) (pilM) [Acinetobacter pittii strain AP8900]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATCGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTGTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GTAATGCCAACATTCCAGGGCTTGCTAAATTGTTGCAGCAAAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.307	100	0.963
comM	Acinetobacter nosocomialis M2	96.307	100	0.963
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42