Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   QEP22_RS06545 Genome accession   NZ_CP123578
Coordinates   1169742..1170983 (-) Length   413 a.a.
NCBI ID   WP_043976547.1    Uniprot ID   -
Organism   Priestia megaterium strain HyangYak-01     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1164742..1175983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP22_RS06525 spoVS 1165302..1165562 (-) 261 WP_003181955.1 stage V sporulation protein SpoVS -
  QEP22_RS06530 - 1165786..1166583 (-) 798 WP_043976551.1 TIGR00282 family metallophosphoesterase -
  QEP22_RS06535 rny 1166665..1168227 (-) 1563 WP_176521306.1 ribonuclease Y -
  QEP22_RS06540 recA 1168505..1169542 (-) 1038 WP_013058804.1 recombinase RecA Machinery gene
  QEP22_RS06545 cinA 1169742..1170983 (-) 1242 WP_043976547.1 competence/damage-inducible protein A Machinery gene
  QEP22_RS06550 pgsA 1171000..1171584 (-) 585 WP_043976546.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QEP22_RS06555 - 1171729..1172712 (-) 984 WP_241771330.1 RodZ domain-containing protein -
  QEP22_RS06560 - 1172725..1173516 (-) 792 WP_013058808.1 DUF3388 domain-containing protein -
  QEP22_RS06565 - 1173730..1173990 (-) 261 WP_013058809.1 DUF3243 domain-containing protein -
  QEP22_RS06570 - 1174056..1174781 (-) 726 WP_162214894.1 SDR family oxidoreductase -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 44928.03 Da        Isoelectric Point: 4.9140

>NTDB_id=821301 QEP22_RS06545 WP_043976547.1 1169742..1170983(-) (cinA) [Priestia megaterium strain HyangYak-01]
MMNAEIIGVGSELLLGQIANTNAQYLSKKLAELGINVYYHTVVGDNAQRLKEVIATAQTRAELIIFTGGLGPTKDDLTKE
TIASVLGVELTTNAEALESIEAYFKQSNRIMTPNNKKQAIVLEGSAVLPNDYGMAPGMGLTVEGKHYMLFPGPPKELYPM
YESYGQEFLAQKLELKESIESRVLRFFGIGESQLETEIEDLLDAQTNPTIAPLAGDGEVTLRLTAKHADAAEAQRMLDEV
EKTISERVGEYLYGYEATSLHNELVKELTAQGLTIASAESLTGGLFSERLTTVSGAGEAVKGSLVAYHYEIKQNILGVSE
HTLNQYGAVSEQCAAEMAQRIQQLYKTDIGIGFTGVAGPSKQEGHPVGTVYIGVAYKDQAPQVYSLQLSGSRQGIRSRTV
NYGCHYVLKMIKK

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=821301 QEP22_RS06545 WP_043976547.1 1169742..1170983(-) (cinA) [Priestia megaterium strain HyangYak-01]
ATGATGAACGCTGAAATTATTGGAGTCGGCTCTGAGCTGCTGCTTGGACAAATTGCCAATACAAACGCTCAGTATTTATC
GAAAAAATTAGCCGAACTTGGAATTAATGTTTACTATCATACGGTAGTAGGAGATAATGCACAGCGCTTAAAAGAAGTGA
TTGCTACAGCTCAAACGCGTGCGGAGTTAATTATTTTCACAGGCGGGCTTGGTCCTACAAAAGATGATTTAACAAAAGAA
ACAATTGCGAGTGTGCTAGGAGTAGAGCTGACAACAAATGCAGAAGCACTTGAAAGCATTGAAGCCTATTTCAAACAGTC
AAATCGTATCATGACACCTAACAATAAAAAACAGGCAATTGTGCTAGAAGGTTCGGCAGTGCTTCCTAACGATTACGGAA
TGGCTCCAGGTATGGGGCTTACGGTAGAGGGAAAACACTATATGCTATTCCCCGGGCCTCCAAAAGAGCTTTATCCAATG
TATGAATCGTATGGTCAAGAATTTTTAGCTCAAAAGCTTGAATTAAAAGAAAGTATTGAATCACGCGTTCTTCGCTTTTT
CGGAATAGGAGAATCACAGCTTGAGACGGAAATTGAAGATTTGCTTGATGCGCAAACCAACCCGACGATTGCGCCGCTAG
CAGGAGATGGAGAAGTGACGCTTCGCTTAACTGCTAAGCACGCTGATGCCGCTGAAGCACAGCGCATGTTAGACGAAGTG
GAAAAAACCATTTCAGAGCGCGTAGGCGAGTATTTATATGGATACGAAGCAACTTCTTTACATAATGAATTGGTAAAAGA
ATTAACGGCGCAAGGCTTGACGATTGCTTCAGCCGAAAGTTTAACCGGCGGTTTATTCAGCGAACGTTTAACAACTGTTT
CAGGTGCTGGAGAAGCTGTAAAAGGCAGCCTGGTCGCCTATCATTATGAAATCAAGCAAAATATCCTCGGAGTGAGCGAA
CACACGCTGAATCAGTACGGAGCCGTTAGCGAGCAGTGCGCGGCTGAAATGGCTCAGCGTATTCAACAGTTATACAAAAC
GGATATTGGCATCGGGTTTACAGGTGTAGCTGGACCTTCCAAACAAGAAGGACATCCTGTAGGAACAGTATATATAGGGG
TAGCCTATAAAGATCAAGCTCCTCAAGTTTACAGCCTGCAGCTATCTGGAAGCCGCCAGGGGATTCGTTCACGAACGGTT
AATTATGGCTGTCATTACGTATTAAAGATGATAAAGAAATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(181-254)

Competence-damaged protein (CinA)

(258-410)

Probable molybdopterin binding domain (MoCF_biosynth)

(6-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.512

99.274

0.591
  cinA Streptococcus mitis NCTC 12261

46.905

100

0.477
  cinA Streptococcus pneumoniae TIGR4

46.19

100

0.47
  cinA Streptococcus mitis SK321

46.19

100

0.47
  cinA Streptococcus pneumoniae Rx1

45.714

100

0.465
  cinA Streptococcus pneumoniae R6

45.714

100

0.465
  cinA Streptococcus pneumoniae D39

45.476

100

0.462
  cinA Streptococcus mutans UA159

44.634

99.274

0.443