Detailed information NTG0820037

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: R4707_RS09485
• Genome accession: NZ_CP137113
• Coordinates: 1802077..1802667 (+)
• Length: 196 a.a.
• NCBI ID: WP_081543082.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain ZGX
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1797077..1807667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4707_RS09455	-	1797463..1797918 (-)	456	WP_001823744.1	8-oxo-dGTP diphosphatase	-
R4707_RS09460	-	1797938..1799113 (-)	1176	WP_081543080.1	NAD(P)/FAD-dependent oxidoreductase	-
R4707_RS09465	-	1799172..1800017 (-)	846	WP_000219939.1	DegV family protein	-
R4707_RS09470	-	1800142..1800699 (+)	558	WP_069302270.1	TetR/AcrR family transcriptional regulator	-
R4707_RS09475	-	1800718..1801185 (+)	468	WP_000136976.1	cytidine/deoxycytidylate deaminase family protein	-
R4707_RS09480	upp	1801274..1801903 (+)	630	WP_000515972.1	uracil phosphoribosyltransferase	-
R4707_RS09485	clpP	1802077..1802667 (+)	591	WP_081543082.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
R4707_RS09490	-	1802746..1802994 (+)	249	WP_000462126.1	YlbG family protein	-
R4707_RS09495	-	1803096..1804256 (+)	1161	WP_000726141.1	ABC transporter substrate-binding protein	-
R4707_RS09500	-	1804524..1805393 (+)	870	WP_000941426.1	branched-chain amino acid ABC transporter permease	-
R4707_RS09505	-	1805397..1806353 (+)	957	WP_000662293.1	branched-chain amino acid ABC transporter permease	-
R4707_RS09510	-	1806353..1807117 (+)	765	WP_001186003.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21328.37 Da
• Isoelectric Point: 4.5654

>NTDB_id=820037 R4707_RS09485 WP_081543082.1 1802077..1802667(+) (clpP) [Streptococcus pneumoniae strain ZGX]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQ
SMEKVHADAERDNWMSAQVTLEYGFIDEIMANNSLN

Nucleotide

• Length: 591 bp

>NTDB_id=820037 R4707_RS09485 WP_081543082.1 1802077..1802667(+) (clpP) [Streptococcus pneumoniae strain ZGX]
ATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCTTACGATATTTACTCACGTCTTCTCAAAGACCGCAT
CATTATGCTGACAGGTCCGGTTGAAGACAATATGGCTAACTCTGTTATTGCCCAATTGCTTTTCTTGGATGCCCAAGATA
GTACAAAAGATATTTACCTTTATGTCAATACACCAGGTGGTTCTGTTTCAGCTGGTTTGGCAATCGTAGATACCATGAAC
TTTATCAAGGCAGATGTCCAAACCATTGTTATGGGAATGGCTGCATCTATGGGAACAGTCATCGCATCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCTGAATACATGATTCACCAACCAATGGGCGGTACAGGTGGTGGTACCCAACAAA
CTGATATGGCTATCGCTGCAGAACACTTGCTCAAAACTCGTAATACCTTGGAAAAAATCTTGGCTGAAAATTCAGGTCAG
TCAATGGAAAAAGTCCATGCAGATGCAGAACGTGATAACTGGATGAGCGCCCAGGTAACACTTGAATATGGCTTTATTGA
TGAAATTATGGCCAACAATTCATTGAACTAA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	99.49	100	0.995
clpP	Streptococcus pneumoniae D39	99.49	100	0.995
clpP	Streptococcus pneumoniae R6	99.49	100	0.995
clpP	Streptococcus pneumoniae TIGR4	99.49	100	0.995
clpP	Streptococcus thermophilus LMG 18311	92.308	99.49	0.918
clpP	Streptococcus thermophilus LMD-9	92.308	99.49	0.918
clpP	Streptococcus pyogenes JRS4	90.256	99.49	0.898
clpP	Streptococcus pyogenes MGAS315	90.256	99.49	0.898
clpP	Streptococcus mutans UA159	85.204	100	0.852
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	84.615	99.49	0.842
clpP	Lactococcus lactis subsp. cremoris KW2	84.103	99.49	0.837
clpP	Bacillus subtilis subsp. subtilis str. 168	58.333	97.959	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566