Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | QBS05_RS21630 | Genome accession | NZ_CP121795 |
| Coordinates | 4683522..4683842 (+) | Length | 106 a.a. |
| NCBI ID | WP_017780975.1 | Uniprot ID | - |
| Organism | Aeromonas dhakensis strain DAMIAN 12594 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4678522..4688842
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QBS05_RS21605 | - | 4679158..4679793 (-) | 636 | WP_010636289.1 | hemolysin III family protein | - |
| QBS05_RS21610 | - | 4680012..4681517 (+) | 1506 | WP_279462277.1 | pyridoxal-dependent decarboxylase | - |
| QBS05_RS21615 | - | 4681622..4682185 (+) | 564 | WP_005309592.1 | septation protein A | - |
| QBS05_RS21620 | - | 4682210..4682506 (+) | 297 | WP_005309589.1 | YciI family protein | - |
| QBS05_RS21625 | cysQ | 4682585..4683355 (-) | 771 | WP_279462280.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| QBS05_RS21630 | comEA | 4683522..4683842 (+) | 321 | WP_017780975.1 | ComEA family DNA-binding protein | Machinery gene |
| QBS05_RS21635 | galU | 4683937..4684848 (+) | 912 | WP_005309577.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| QBS05_RS21640 | - | 4685062..4686459 (+) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| QBS05_RS21645 | - | 4686532..4687503 (-) | 972 | WP_005309570.1 | response regulator | - |
| QBS05_RS21650 | - | 4687859..4688536 (+) | 678 | WP_279462286.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11155.96 Da Isoelectric Point: 8.9714
>NTDB_id=814269 QBS05_RS21630 WP_017780975.1 4683522..4683842(+) (comEA) [Aeromonas dhakensis strain DAMIAN 12594]
MNYKTLTATLLLSCLPLLSQPLLAADKPAATPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAATPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=814269 QBS05_RS21630 WP_017780975.1 4683522..4683842(+) (comEA) [Aeromonas dhakensis strain DAMIAN 12594]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCACACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCACACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA | Legionella pneumophila strain ERS1305867 |
42.857 |
92.453 |
0.396 |
| comEA | Legionella pneumophila str. Paris |
42.857 |
92.453 |
0.396 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |