Detailed information NTG0812811

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: F6I35_RS01590
• Genome accession: NZ_CP136160
• Coordinates: 267467..267895 (+)
• Length: 142 a.a.
• NCBI ID: WP_024053128.1
• Uniprot ID: A0ABS3GE86
• Organism: Streptococcus anginosus strain UMB8616
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 262467..272895

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6I35_RS01555 (F6I35_0001555)	-	262812..264851 (+)	2040	WP_150867029.1	DUF859 family phage minor structural protein	-
F6I35_RS01560 (F6I35_0001560)	-	264864..265466 (+)	603	WP_150867027.1	DUF1366 domain-containing protein	-
F6I35_RS01565 (F6I35_0001565)	-	265484..265789 (+)	306	WP_049507630.1	hypothetical protein	-
F6I35_RS01570 (F6I35_0001570)	-	265801..266133 (+)	333	WP_049507631.1	phage holin	-
F6I35_RS01575 (F6I35_0001575)	-	266135..266881 (+)	747	WP_150867025.1	CHAP domain-containing protein	-
F6I35_RS01580 (F6I35_0001580)	-	266997..267236 (+)	240	WP_150867023.1	hypothetical protein	-
F6I35_RS01585 (F6I35_0001585)	comGC	267238..267507 (+)	270	WP_003039250.1	competence type IV pilus major pilin ComGC	Machinery gene
F6I35_RS01590 (F6I35_0001590)	comGD	267467..267895 (+)	429	WP_024053128.1	competence type IV pilus minor pilin ComGD	Machinery gene
F6I35_RS01595 (F6I35_0001595)	comGE/cglE	267867..268160 (+)	294	WP_024053127.1	competence type IV pilus minor pilin ComGE	Machinery gene
F6I35_RS01600 (F6I35_0001600)	comGF/cglF	268144..268581 (+)	438	WP_024053126.1	competence type IV pilus minor pilin ComGF	Machinery gene
F6I35_RS01605 (F6I35_0001605)	comGG/cglG	268562..268888 (+)	327	WP_257360478.1	competence type IV pilus minor pilin ComGG	Machinery gene
F6I35_RS01610 (F6I35_0001610)	comGH	268960..269913 (+)	954	WP_024053125.1	class I SAM-dependent methyltransferase	Machinery gene
F6I35_RS01615 (F6I35_0001615)	-	269960..271159 (+)	1200	WP_024053124.1	acetate kinase	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 16315.79 Da
• Isoelectric Point: 10.2800

>NTDB_id=812811 F6I35_RS01590 WP_024053128.1 267467..267895(+) (comGD) [Streptococcus anginosus strain UMB8616]
MRNIQKKLVLLQIKGFTLLESLLTLFITSFLLLAVSGSVRSSFEQVEEQIFFLEFEHFYRESQKLSSSAQSQLDMNFSRE
RISNGYNHLVVPRSIQAPEDLTLHFDKAGGNSSLGKIVFQTKKQTITYQLYLGNGKFKKTTR

Nucleotide

• Length: 429 bp

>NTDB_id=812811 F6I35_RS01590 WP_024053128.1 267467..267895(+) (comGD) [Streptococcus anginosus strain UMB8616]
ATGCGAAACATACAAAAGAAGCTCGTTCTGTTGCAGATTAAGGGATTTACGCTTTTGGAAAGTTTGCTGACATTATTTAT
AACGAGTTTCTTATTGCTTGCGGTGTCGGGCTCTGTTCGTTCTTCTTTTGAACAGGTGGAAGAGCAGATTTTCTTTCTGG
AGTTTGAGCATTTTTATCGGGAAAGTCAGAAGTTGAGTAGCTCAGCTCAAAGTCAGCTGGACATGAATTTTTCTCGTGAG
AGGATTTCAAATGGTTACAACCATTTGGTAGTTCCTCGCTCGATTCAAGCGCCAGAAGATTTGACGCTTCATTTTGATAA
GGCTGGTGGCAATTCATCGCTCGGAAAGATTGTCTTTCAGACGAAAAAGCAGACAATTACGTATCAATTATATCTAGGAA
ATGGGAAATTTAAGAAAACAACACGTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus gordonii str. Challis substr. CH1	64.122	92.254	0.592
comGD/cglD	Streptococcus mitis NCTC 12261	58.14	90.845	0.528
comGD/cglD	Streptococcus mitis SK321	57.48	89.437	0.514
comGD/cglD	Streptococcus pneumoniae Rx1	57.48	89.437	0.514
comGD/cglD	Streptococcus pneumoniae D39	57.48	89.437	0.514
comGD/cglD	Streptococcus pneumoniae R6	57.48	89.437	0.514
comGD/cglD	Streptococcus pneumoniae TIGR4	56.693	89.437	0.507
comGD	Streptococcus mutans UA140	53.077	91.549	0.486
comGD	Streptococcus mutans UA159	53.077	91.549	0.486