Detailed information NTG0811998

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: P9J61_RS07755
• Genome accession: NZ_CP121370
• Coordinates: 1585801..1586502 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594581.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain LRB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1580801..1591502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P9J61_RS07720 (P9J61_07720)	kdsB	1581324..1582085 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
P9J61_RS07725 (P9J61_07725)	-	1582097..1583077 (+)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
P9J61_RS07730 (P9J61_07730)	-	1583089..1583430 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
P9J61_RS07735 (P9J61_07735)	-	1583448..1584221 (+)	774	WP_000497302.1	TatD family hydrolase	-
P9J61_RS07740 (P9J61_07740)	-	1584259..1584867 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
P9J61_RS07745 (P9J61_07745)	-	1584877..1585431 (+)	555	WP_032036393.1	type II secretion system protein	-
P9J61_RS07750 (P9J61_07750)	xcpV	1585421..1585801 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
P9J61_RS07755 (P9J61_07755)	xcpW	1585801..1586502 (+)	702	WP_000594581.1	type II secretion system minor pseudopilin GspJ	Machinery gene
P9J61_RS07760 (P9J61_07760)	gspK	1586502..1587461 (+)	960	WP_032036395.1	type II secretion system minor pseudopilin GspK	-
P9J61_RS07765 (P9J61_07765)	-	1587691..1588287 (+)	597	WP_032036397.1	6-carboxytetrahydropterin synthase	-
P9J61_RS07770 (P9J61_07770)	ung	1588338..1589051 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
P9J61_RS07775 (P9J61_07775)	-	1589048..1590172 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
P9J61_RS07780 (P9J61_07780)	tadA	1590179..1590682 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
P9J61_RS07785 (P9J61_07785)	-	1590752..1591195 (+)	444	WP_002057383.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26731.68 Da
• Isoelectric Point: 9.3468

>NTDB_id=811998 P9J61_RS07755 WP_000594581.1 1585801..1586502(+) (xcpW) [Acinetobacter baumannii strain LRB]
MIKNKYIHIRSFSSRLAERSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=811998 P9J61_RS07755 WP_000594581.1 1585801..1586502(+) (xcpW) [Acinetobacter baumannii strain LRB]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGAACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAAATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983