Detailed information NTG0811078

Bioinformatically predicted

Overview

• Name: comD/comD2
• Type: Regulator
• Locus tag: P7Y79_RS00985
• Genome accession: NZ_CP121207
• Coordinates: 210393..211340 (+)
• Length: 315 a.a.
• NCBI ID: WP_278007567.1
• Uniprot ID: -
• Organism: Streptococcus ruminicola strain CNU_77-47
• Function: phosphorylation of ComE (predicted from homology) Competence regulation

Genomic Context

Location: 205393..216340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P7Y79_RS00955 (P7Y79_00955)	comE/comE1	206315..207046 (+)	732	WP_166043387.1	response regulator transcription factor	Regulator
P7Y79_RS00960 (P7Y79_00960)	-	207052..208377 (+)	1326	WP_157327340.1	GHKL domain-containing protein	-
P7Y79_RS00965 (P7Y79_00965)	comC/comC1	208400..208552 (-)	153	WP_157327338.1	hypothetical protein	Regulator
P7Y79_RS00970 (P7Y79_00970)	-	208814..208963 (+)	150	WP_278007565.1	bacteriocin	-
P7Y79_RS00975 (P7Y79_00975)	-	208976..209281 (+)	306	WP_158914537.1	bacteriocin immunity protein	-
P7Y79_RS00980 (P7Y79_00980)	-	209309..209431 (+)	123	WP_278007566.1	hypothetical protein	-
P7Y79_RS00985 (P7Y79_00985)	comD/comD2	210393..211340 (+)	948	WP_278007567.1	GHKL domain-containing protein	Regulator
P7Y79_RS00990 (P7Y79_00990)	comD/comD3	211337..212719 (+)	1383	WP_278007568.1	GHKL domain-containing protein	Regulator
P7Y79_RS00995 (P7Y79_00995)	comE/comE2	213380..214114 (+)	735	WP_052071091.1	LytTR family DNA-binding domain-containing protein	Regulator
P7Y79_RS01005 (P7Y79_01005)	rsgA	214432..215304 (+)	873	WP_006531894.1	ribosome small subunit-dependent GTPase A	-
P7Y79_RS01010 (P7Y79_01010)	rpe	215311..215973 (+)	663	WP_006531895.1	ribulose-phosphate 3-epimerase	-

Sequence

Protein

• Length: 315 a.a.
• Molecular weight: 36049.18 Da
• Isoelectric Point: 4.8091

>NTDB_id=811078 P7Y79_RS00985 WP_278007567.1 210393..211340(+) (comD/comD2) [Streptococcus ruminicola strain CNU_77-47]
MYYLVSRWLNIDISNVSQSLKKHIEPKIFNIINILMVSYFLFMDAIAIVKPFHNADNDAIRGIVAFIYLILLFVFLFYLN
FRHGQEQKNELLRNQEMELAALENYSKHVESLYQEVRSFRHDYANVLMSLKVGIDQGNLDDIKKIYDEITADSTKLVKNN
KFDLTRLANITDSGVKSLMSAKFLQAENQGIAISLEVAEEMGTPKISLISYIRILSILFDNAIEGALESAEPKISVANFY
QDGDFVFMIENSTKEKSVDLTKIFERGYSTKGDNRGLGLATLMDFQDDYENLSVETHSSDCTFTQVVRIYEGESR

Nucleotide

• Length: 948 bp

>NTDB_id=811078 P7Y79_RS00985 WP_278007567.1 210393..211340(+) (comD/comD2) [Streptococcus ruminicola strain CNU_77-47]
GTGTATTATTTAGTTTCACGATGGTTAAATATTGATATTTCAAATGTAAGTCAAAGTTTAAAAAAACACATCGAGCCAAA
AATTTTTAATATTATTAATATCTTGATGGTCTCTTATTTTTTATTCATGGATGCCATTGCTATTGTAAAACCTTTTCATA
ATGCTGATAACGATGCAATAAGGGGAATTGTTGCTTTCATTTATCTCATCCTTCTTTTCGTCTTCCTCTTTTATCTCAAT
TTCCGTCATGGGCAAGAGCAGAAAAATGAATTGCTTCGCAATCAGGAGATGGAGCTTGCAGCACTTGAAAATTATAGCAA
GCACGTGGAAAGTTTATATCAAGAAGTTCGCAGTTTTCGTCATGACTATGCTAATGTCTTAATGAGTTTGAAGGTTGGAA
TTGACCAAGGCAATCTGGATGACATCAAGAAAATTTACGACGAAATCACGGCCGATTCGACGAAACTAGTCAAAAATAAT
AAATTTGACTTGACTCGTCTTGCTAACATCACAGATAGCGGCGTCAAAAGTCTGATGTCTGCTAAATTTTTGCAGGCGGA
AAATCAAGGAATTGCAATTAGCCTAGAAGTCGCCGAAGAAATGGGAACTCCGAAGATTTCATTGATTTCCTATATTCGAA
TTTTGTCGATTCTGTTTGATAATGCCATAGAAGGAGCTTTGGAATCTGCAGAGCCAAAAATCTCAGTTGCTAATTTCTAC
CAAGATGGCGACTTTGTTTTCATGATTGAAAATTCCACTAAGGAAAAATCGGTAGATTTAACTAAGATTTTTGAGCGTGG
CTACTCAACCAAAGGAGACAATCGTGGGCTTGGTCTAGCCACACTAATGGATTTCCAAGATGACTACGAAAATCTGTCGG
TTGAAACCCACAGTTCAGATTGCACATTCACACAAGTAGTGAGAATATACGAGGGAGAGAGTAGATGA

Domains

Predicted by InterproScan.

• GHKL domain (HATPase_c_5) (212-309)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comD/comD2	Streptococcus equinus JB1	94.921	100	0.949
comD/comD3	Streptococcus equinus JB1	81.731	99.048	0.81
comD/blpH	Streptococcus mutans UA159	38.111	97.46	0.371