Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC/comC1   Type   Regulator
Locus tag   P7Y79_RS00965 Genome accession   NZ_CP121207
Coordinates   208400..208552 (-) Length   50 a.a.
NCBI ID   WP_157327338.1    Uniprot ID   -
Organism   Streptococcus ruminicola strain CNU_77-47     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 203400..213552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7Y79_RS00940 (P7Y79_00940) - 204119..204346 (+) 228 WP_278007563.1 ComC/BlpC family peptide pheromone/bacteriocin -
  P7Y79_RS00945 (P7Y79_00945) - 204412..204723 (+) 312 WP_061408660.1 hypothetical protein -
  P7Y79_RS00950 (P7Y79_00950) - 204913..205527 (+) 615 WP_278007564.1 thioredoxin fold domain-containing protein -
  P7Y79_RS00955 (P7Y79_00955) comE/comE1 206315..207046 (+) 732 WP_166043387.1 response regulator transcription factor Regulator
  P7Y79_RS00960 (P7Y79_00960) - 207052..208377 (+) 1326 WP_157327340.1 GHKL domain-containing protein -
  P7Y79_RS00965 (P7Y79_00965) comC/comC1 208400..208552 (-) 153 WP_157327338.1 hypothetical protein Regulator
  P7Y79_RS00970 (P7Y79_00970) - 208814..208963 (+) 150 WP_278007565.1 bacteriocin -
  P7Y79_RS00975 (P7Y79_00975) - 208976..209281 (+) 306 WP_158914537.1 bacteriocin immunity protein -
  P7Y79_RS00980 (P7Y79_00980) - 209309..209431 (+) 123 WP_278007566.1 hypothetical protein -
  P7Y79_RS00985 (P7Y79_00985) comD/comD2 210393..211340 (+) 948 WP_278007567.1 GHKL domain-containing protein Regulator
  P7Y79_RS00990 (P7Y79_00990) comD/comD3 211337..212719 (+) 1383 WP_278007568.1 GHKL domain-containing protein Regulator

Sequence

Protein


Download         Length: 50 a.a.        Molecular weight: 5625.47 Da        Isoelectric Point: 4.9306

>NTDB_id=811077 P7Y79_RS00965 WP_157327338.1 208400..208552(-) (comC/comC1) [Streptococcus ruminicola strain CNU_77-47]
MTEWKMSELESVKELTDSDLEKTVGGDNIPLLTGVGDLFKIFKGKNKNHM

Nucleotide


Download         Length: 153 bp        

>NTDB_id=811077 P7Y79_RS00965 WP_157327338.1 208400..208552(-) (comC/comC1) [Streptococcus ruminicola strain CNU_77-47]
ATGACAGAATGGAAAATGTCAGAGTTAGAATCAGTCAAAGAATTGACTGATTCTGATTTGGAGAAGACAGTTGGAGGGGA
TAATATTCCTCTACTTACTGGTGTTGGTGATTTATTTAAAATTTTTAAAGGAAAAAATAAAAATCACATGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC/comC1 Streptococcus equinus JB1

77.551

98

0.76