Detailed information NTG0809797

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: QN328_RS00540
• Genome accession: NZ_CP135102
• Coordinates: 101718..102131 (+)
• Length: 137 a.a.
• NCBI ID: WP_017646959.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain HU32/21
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 96718..107131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN328_RS00520 (QN328_00520)	-	98971..99336 (+)	366	WP_000285373.1	DUF1033 family protein	-
QN328_RS00525 (QN328_00525)	comGA	99509..100480 (+)	972	WP_000250805.1	competence type IV pilus ATPase ComGA	Machinery gene
QN328_RS00530 (QN328_00530)	comGB	100374..101417 (+)	1044	WP_223295889.1	competence type IV pilus assembly protein ComGB	Machinery gene
QN328_RS00535 (QN328_00535)	comGC/cglC	101414..101743 (+)	330	WP_000793380.1	competence type IV pilus major pilin ComGC	Machinery gene
QN328_RS00540 (QN328_00540)	comGD	101718..102131 (+)	414	WP_017646959.1	competence type IV pilus minor pilin ComGD	Machinery gene
QN328_RS00545 (QN328_00545)	comGE	102103..102402 (+)	300	WP_025195478.1	competence type IV pilus minor pilin ComGE	Machinery gene
QN328_RS00550 (QN328_00550)	comGF	102356..102817 (+)	462	WP_001874060.1	competence type IV pilus minor pilin ComGF	Machinery gene
QN328_RS00555 (QN328_00555)	comGG	102795..103166 (+)	372	WP_000601104.1	competence type IV pilus minor pilin ComGG	Machinery gene
QN328_RS00560 (QN328_00560)	comGH	103281..104255 (+)	975	WP_410530968.1	class I SAM-dependent methyltransferase	Machinery gene
QN328_RS00565 (QN328_00565)	-	104287..105480 (+)	1194	WP_000047534.1	acetate kinase	-
QN328_RS00570 (QN328_00570)	-	105632..105838 (+)	207	WP_000798241.1	helix-turn-helix transcriptional regulator	-
QN328_RS00575 (QN328_00575)	-	105897..106034 (+)	138	WP_001865900.1	hypothetical protein	-
QN328_RS00580 (QN328_00580)	-	106075..106530 (+)	456	WP_000905673.1	hypothetical protein	-

Sequence

Protein

• Length: 137 a.a.
• Molecular weight: 15910.35 Da
• Isoelectric Point: 9.9787

>NTDB_id=809797 QN328_RS00540 WP_017646959.1 101718..102131(+) (comGD) [Streptococcus agalactiae strain HU32/21]
MVLRKFQVKAFTVLESLIALSVVAFMTLVFSTSFNNIFRQVEETIFFISFEHLYRDTQKLSAFGQKKQTLTISHNYLENT
YERLYLPKTVKVVKSDTLAFDANGGNSSLAKIQFECYRKTVTYQLYIGSGNYRKKEN

Nucleotide

• Length: 414 bp

>NTDB_id=809797 QN328_RS00540 WP_017646959.1 101718..102131(+) (comGD) [Streptococcus agalactiae strain HU32/21]
ATGGTTCTCAGAAAATTTCAAGTTAAAGCATTTACTGTTTTGGAGAGCCTTATTGCATTATCAGTAGTGGCATTTATGAC
GTTAGTATTTTCAACATCATTTAATAATATTTTTAGGCAGGTTGAAGAAACAATTTTCTTCATATCCTTTGAACATCTTT
ATAGAGATACTCAGAAATTGAGTGCATTTGGTCAGAAGAAACAAACCCTTACAATCTCTCATAATTATCTCGAAAATACT
TATGAGAGACTTTATTTACCTAAAACTGTAAAAGTAGTCAAAAGTGACACACTTGCATTTGACGCTAATGGAGGGAATTC
AAGCTTGGCAAAAATTCAATTTGAATGTTATAGAAAAACTGTCACGTATCAATTATATATAGGAAGTGGTAACTATCGTA
AGAAAGAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus mutans UA140	51.515	96.35	0.496
comGD	Streptococcus mutans UA159	51.515	96.35	0.496
comGD	Streptococcus gordonii str. Challis substr. CH1	46.667	98.54	0.46
comGD/cglD	Streptococcus mitis NCTC 12261	40.299	97.81	0.394
comGD/cglD	Streptococcus pneumoniae TIGR4	42.52	92.701	0.394
comGD/cglD	Streptococcus mitis SK321	42.52	92.701	0.394
comGD/cglD	Streptococcus pneumoniae Rx1	41.732	92.701	0.387
comGD/cglD	Streptococcus pneumoniae D39	41.732	92.701	0.387
comGD/cglD	Streptococcus pneumoniae R6	41.732	92.701	0.387