Detailed information NTG0809799

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: QN328_RS00550
• Genome accession: NZ_CP135102
• Coordinates: 102356..102817 (+)
• Length: 153 a.a.
• NCBI ID: WP_001874060.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain HU32/21
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 97356..107817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN328_RS00520 (QN328_00520)	-	98971..99336 (+)	366	WP_000285373.1	DUF1033 family protein	-
QN328_RS00525 (QN328_00525)	comGA	99509..100480 (+)	972	WP_000250805.1	competence type IV pilus ATPase ComGA	Machinery gene
QN328_RS00530 (QN328_00530)	comGB	100374..101417 (+)	1044	WP_223295889.1	competence type IV pilus assembly protein ComGB	Machinery gene
QN328_RS00535 (QN328_00535)	comGC/cglC	101414..101743 (+)	330	WP_000793380.1	competence type IV pilus major pilin ComGC	Machinery gene
QN328_RS00540 (QN328_00540)	comGD	101718..102131 (+)	414	WP_017646959.1	competence type IV pilus minor pilin ComGD	Machinery gene
QN328_RS00545 (QN328_00545)	comGE	102103..102402 (+)	300	WP_025195478.1	competence type IV pilus minor pilin ComGE	Machinery gene
QN328_RS00550 (QN328_00550)	comGF	102356..102817 (+)	462	WP_001874060.1	competence type IV pilus minor pilin ComGF	Machinery gene
QN328_RS00555 (QN328_00555)	comGG	102795..103166 (+)	372	WP_000601104.1	competence type IV pilus minor pilin ComGG	Machinery gene
QN328_RS00560 (QN328_00560)	comGH	103281..104255 (+)	975	WP_410530968.1	class I SAM-dependent methyltransferase	Machinery gene
QN328_RS00565 (QN328_00565)	-	104287..105480 (+)	1194	WP_000047534.1	acetate kinase	-
QN328_RS00570 (QN328_00570)	-	105632..105838 (+)	207	WP_000798241.1	helix-turn-helix transcriptional regulator	-
QN328_RS00575 (QN328_00575)	-	105897..106034 (+)	138	WP_001865900.1	hypothetical protein	-
QN328_RS00580 (QN328_00580)	-	106075..106530 (+)	456	WP_000905673.1	hypothetical protein	-
QN328_RS00585 (QN328_00585)	-	106599..107264 (+)	666	WP_000008113.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17861.86 Da
• Isoelectric Point: 9.8392

>NTDB_id=809799 QN328_RS00550 WP_001874060.1 102356..102817(+) (comGF) [Streptococcus agalactiae strain HU32/21]
MKVIRKFCTYQKLRVKAFTLLECLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSEWVLLTQQLNAEFEGAHLEYLRQ
NKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET

Nucleotide

• Length: 462 bp

>NTDB_id=809799 QN328_RS00550 WP_001874060.1 102356..102817(+) (comGF) [Streptococcus agalactiae strain HU32/21]
TTGAAGGTAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAAAGCATTTACACTTTTAGAATGTTTGGTAGCATT
GGTTACAATCACAGGAGCTTTACTAGTTTATCAAGGACTGACAAAATTGTTGGCTCAACAGATAGTAGTGATGTCTTCTT
CCAGTCAGTCTGAATGGGTGTTATTAACTCAGCAACTAAATGCAGAATTTGAAGGCGCTCATCTGGAATATTTAAGACAG
AACAAACTTTATTTACGTAAGCAAGATAAGATTGTAACCTTTGGCAAATCTAATAAAGATGATTTCCGTAAGACAGGTTA
TGATGGTCGAGGTTATCAACCAATGGTTTATGGGTTAGACAATTGTCAAATGAGTCAGACCAAAAGTATGGTAAAACTTG
TTTTTTATTTTAAGGACGGGTTAAAAAGGACATTTTACTATGATTTTAAAGAAGAAACTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (49-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.887	92.81	0.444
comGF	Streptococcus mutans UA140	47.887	92.81	0.444
comGF/cglF	Streptococcus pneumoniae Rx1	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae D39	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae R6	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae TIGR4	43.165	90.85	0.392
comGF/cglF	Streptococcus mitis SK321	44.03	87.582	0.386
comGF/cglF	Streptococcus mitis NCTC 12261	43.284	87.582	0.379
comGF	Lactococcus lactis subsp. cremoris KW2	40.714	91.503	0.373