Detailed information NTG0809644

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: P4G50_RS25285
• Genome accession: NZ_CP120958
• Coordinates: 4924491..4925072 (+)
• Length: 193 a.a.
• NCBI ID: WP_001049162.1
• Uniprot ID: A0A9W5QPC2
• Organism: Bacillus cereus strain SCBCM001
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4919491..4930072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P4G50_RS25250	-	4920487..4920693 (+)	207	WP_000216166.1	DUF1657 domain-containing protein	-
P4G50_RS25255	-	4920787..4921272 (+)	486	WP_001228545.1	YhcN/YlaJ family sporulation lipoprotein	-
P4G50_RS25260	spoVAC	4921302..4921778 (+)	477	WP_000095399.1	stage V sporulation protein AC	-
P4G50_RS25265	spoVAD	4921779..4922795 (+)	1017	WP_000938975.1	stage V sporulation protein AD	-
P4G50_RS25270	spoVAE	4922792..4923142 (+)	351	WP_000575919.1	stage V sporulation protein AE	-
P4G50_RS25275	-	4923154..4923360 (+)	207	WP_000215916.1	DUF1657 domain-containing protein	-
P4G50_RS25280	-	4923381..4924250 (+)	870	WP_016125686.1	DUF421 domain-containing protein	-
P4G50_RS25285	clpP	4924491..4925072 (+)	582	WP_001049162.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
P4G50_RS25290	-	4925469..4925717 (-)	249	WP_000250307.1	HPr family phosphocarrier protein	-
P4G50_RS25295	whiA	4925741..4926691 (-)	951	WP_000006558.1	DNA-binding protein WhiA	-
P4G50_RS25300	-	4926780..4927733 (-)	954	WP_000712188.1	YvcK family protein	-
P4G50_RS25305	rapZ	4927737..4928618 (-)	882	WP_000138459.1	RNase adapter RapZ	-
P4G50_RS25310	-	4928639..4929097 (-)	459	WP_001190080.1	8-oxo-dGTP diphosphatase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21419.67 Da
• Isoelectric Point: 5.0423

>NTDB_id=809644 P4G50_RS25285 WP_001049162.1 4924491..4925072(+) (clpP) [Bacillus cereus strain SCBCM001]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR

Nucleotide

• Length: 582 bp

>NTDB_id=809644 P4G50_RS25285 WP_001049162.1 4924491..4925072(+) (clpP) [Bacillus cereus strain SCBCM001]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCGGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	90.104	99.482	0.896
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.021	97.409	0.653
clpP	Streptococcus thermophilus LMG 18311	60.417	99.482	0.601
clpP	Streptococcus thermophilus LMD-9	60.417	99.482	0.601
clpP	Lactococcus lactis subsp. cremoris KW2	58.854	99.482	0.585
clpP	Streptococcus pneumoniae D39	57.292	99.482	0.57
clpP	Streptococcus pneumoniae Rx1	57.292	99.482	0.57
clpP	Streptococcus pneumoniae R6	57.292	99.482	0.57
clpP	Streptococcus pneumoniae TIGR4	57.292	99.482	0.57
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	56.771	99.482	0.565
clpP	Streptococcus pyogenes JRS4	55.729	99.482	0.554
clpP	Streptococcus pyogenes MGAS315	55.729	99.482	0.554
clpP	Streptococcus mutans UA159	55.44	100	0.554