Detailed information NTG0805839

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: P3R60_RS02070
• Genome accession: NZ_CP120510
• Coordinates: 429829..431058 (-)
• Length: 409 a.a.
• NCBI ID: WP_218654239.1
• Uniprot ID: -
• Organism: Streptococcus pluranimalium strain SP21-2
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 424829..436058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3R60_RS02040	-	425841..426290 (-)	450	WP_218654241.1	MarR family winged helix-turn-helix transcriptional regulator	-
P3R60_RS02045	tnpA	426681..427145 (-)	465	Protein_406	IS200/IS605 family transposase	-
P3R60_RS02050	rplL	427364..427732 (-)	369	WP_018379545.1	50S ribosomal protein L7/L12	-
P3R60_RS02055	rplJ	427807..428310 (-)	504	WP_104968827.1	50S ribosomal protein L10	-
P3R60_RS02060	-	428563..429210 (-)	648	WP_278025165.1	deoxynucleoside kinase	-
P3R60_RS02065	yihA	429218..429817 (-)	600	WP_104967640.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
P3R60_RS02070	clpX	429829..431058 (-)	1230	WP_218654239.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
P3R60_RS02075	-	431249..431752 (-)	504	WP_278025164.1	dihydrofolate reductase	-
P3R60_RS02080	-	431822..432661 (-)	840	WP_218654237.1	thymidylate synthase	-
P3R60_RS02085	-	432866..434041 (+)	1176	WP_278025322.1	hydroxymethylglutaryl-CoA synthase	-
P3R60_RS02090	-	434034..435314 (+)	1281	WP_316606539.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45129.65 Da
• Isoelectric Point: 4.4527

>NTDB_id=805839 P3R60_RS02070 WP_218654239.1 429829..431058(-) (clpX) [Streptococcus pluranimalium strain SP21-2]
MVGNRTNDTMVYCSFCGKNQDEVKKIIAGNGVFICDECVALSQEIIKEELAEEVLADLTDVPKPKELLDILNQYVVGQDR
AKRALAVAVYNHYKRISFTESRDEEDVVLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPSQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKKVSDDSSYMQEIIAEDIQKFGLIPEFIGRLPVTAALEQLTVDDLIMI
LTEPKNALVRQYETLLSYDNVELDFDRAALESIAAKAIERKTGARGLRSIIEETMMDIMFEVPSQENVKRVRITKEAVDG
TGQPILETA

Nucleotide

• Length: 1230 bp

>NTDB_id=805839 P3R60_RS02070 WP_218654239.1 429829..431058(-) (clpX) [Streptococcus pluranimalium strain SP21-2]
ATGGTTGGAAATCGAACAAATGATACAATGGTTTATTGCTCTTTCTGTGGCAAGAACCAAGATGAGGTTAAAAAAATTAT
TGCAGGTAATGGAGTGTTTATCTGTGATGAATGTGTAGCTTTATCACAAGAAATTATTAAAGAAGAGTTGGCTGAAGAAG
TTTTAGCTGATTTGACAGATGTCCCAAAACCAAAAGAGTTATTGGATATTTTAAACCAATATGTAGTTGGTCAAGATCGC
GCCAAACGTGCTTTAGCCGTTGCTGTTTATAATCATTATAAGCGTATTAGTTTTACAGAAAGTCGTGACGAAGAAGATGT
TGTTCTTCAAAAATCAAATATTTTGATGATTGGACCAACAGGTTCAGGAAAAACCTTCCTCGCCCAAACTTTGGCTAAAA
GTCTCAATGTGCCCTTTGCTATTGCGGATGCGACATCATTGACTGAAGCAGGCTATGTGGGAGAAGACGTTGAGAATATC
CTTTTAAAACTCATTCAAGCAGCAGATTATAATGTTGAGCGTGCCGAACGTGGCATTATCTATGTCGATGAAATCGATAA
AATTGCTAAAAAAGGGGAAAATGTATCTATCACGCGTGACGTTTCCGGTGAAGGGGTACAACAGGCGCTTCTTAAAATTA
TTGAAGGGACAGTTGCTAGTGTACCACCACAAGGTGGGCGTAAACATCCTAGTCAAGAGATGATTCAAATTGACACTAAG
AATATCCTGTTTATTGTTGGTGGTGCTTTTGATGGAATCGAGGAAATCGTTAAACAACGTCTTGGGGAAAAAATCATTGG
CTTTGGTCAAAATAATAAGAAAGTTTCAGATGACTCTTCATACATGCAAGAAATCATTGCTGAAGATATTCAAAAATTTG
GACTTATCCCGGAATTTATCGGTCGCTTGCCTGTGACAGCAGCACTTGAGCAGCTGACTGTTGATGATTTAATCATGATT
TTGACAGAGCCTAAGAATGCTCTTGTTCGACAATATGAAACGCTTCTTTCTTATGACAATGTAGAGTTAGACTTTGATAG
AGCCGCATTAGAATCGATTGCGGCAAAGGCTATTGAACGTAAAACAGGTGCCCGTGGTTTACGTTCAATTATCGAAGAAA
CGATGATGGATATTATGTTTGAAGTACCAAGTCAAGAAAATGTTAAGCGTGTTCGTATCACCAAAGAAGCAGTAGATGGT
ACTGGCCAGCCAATTTTAGAAACGGCTTAG

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	88.753	100	0.888
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.86	98.044	0.548