Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   P3R60_RS02940 Genome accession   NZ_CP120510
Coordinates   603001..604002 (-) Length   333 a.a.
NCBI ID   WP_104967453.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP21-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 598001..609002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS02925 - 599038..600381 (-) 1344 WP_316606611.1 glycosyltransferase family 4 protein -
  P3R60_RS02930 - 600383..601381 (-) 999 WP_316606613.1 glycosyltransferase -
  P3R60_RS02935 - 601454..602908 (-) 1455 WP_278025063.1 alpha-amylase -
  P3R60_RS02940 ccpA 603001..604002 (-) 1002 WP_104967453.1 catabolite control protein A Regulator
  P3R60_RS02945 - 604198..605283 (+) 1086 WP_316606614.1 Xaa-Pro peptidase family protein -
  P3R60_RS02950 - 605331..605891 (-) 561 WP_316606615.1 TIGR00730 family Rossman fold protein -
  P3R60_RS02955 - 605906..607441 (-) 1536 WP_316606616.1 ClC family H(+)/Cl(-) exchange transporter -
  P3R60_RS02960 - 607568..608234 (+) 667 Protein_588 NAD(P)H-dependent oxidoreductase -
  P3R60_RS02965 - 608337..608729 (+) 393 WP_316606617.1 VOC family protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36729.70 Da        Isoelectric Point: 4.9488

>NTDB_id=805841 P3R60_RS02940 WP_104967453.1 603001..604002(-) (ccpA) [Streptococcus pluranimalium strain SP21-2]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRQKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNISNAYFA
LLAKGIDDIAEMYKYNIVLASSDENDDKEVNVVNTLFAKQVDGIIFMGHRLTDKIRAEFSRSRTPVVLAGTIDLEHQLPS
VNIDYEKAVEGVVSDLAKNHQKIAFVSGPLLDDINGKVRLAGYKDALNANGIDYTEGLVFEAKYRYEDGYELAERVINSG
ATAAYVGEDELAVGLLNGLFAAGKRVPEDFEIMTSNDSEIVKYTRPNLSSINQPIYDLGAVAMRMLTKIMNKEELEEKEI
ILNHGVTKRASTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=805841 P3R60_RS02940 WP_104967453.1 603001..604002(-) (ccpA) [Streptococcus pluranimalium strain SP21-2]
ATGAATACAGATGATACTATTACGATTTACGATGTTGCCAGAGAAGCTGGTGTATCGATGGCGACAGTTAGTCGAGTTGT
CAATGGAAACAAAAATGTTAAAGAAAATACTCGTCAGAAAGTACTGGAGGTTATTGACCGTTTAGACTACCGTCCAAATG
CCGTAGCCCGTGGTCTTGCTAGCAAAAAGACCACAACAGTTGGGGTTGTTATTCCAAATATTTCAAATGCTTACTTTGCC
CTCTTAGCCAAAGGGATTGATGATATCGCTGAAATGTACAAATATAACATTGTACTGGCGTCAAGTGATGAGAACGACGA
TAAGGAAGTCAATGTTGTTAATACGCTTTTTGCCAAGCAGGTTGATGGCATTATCTTTATGGGACACCGCCTAACGGATA
AAATTCGTGCTGAGTTCTCACGTTCAAGGACACCAGTAGTTCTTGCAGGTACCATTGACTTAGAACATCAATTACCAAGT
GTTAACATTGATTATGAAAAGGCTGTTGAAGGAGTGGTATCTGACCTAGCTAAAAATCACCAAAAAATCGCCTTTGTCTC
AGGACCACTTCTTGATGATATCAATGGAAAAGTTCGTCTAGCAGGCTATAAGGATGCCCTTAATGCTAATGGTATTGATT
ACACTGAAGGGCTTGTTTTTGAGGCTAAATACCGTTACGAAGATGGTTACGAATTGGCAGAACGTGTGATTAATTCAGGT
GCAACAGCTGCTTATGTTGGAGAAGATGAACTAGCTGTGGGACTCTTGAACGGACTCTTTGCGGCTGGGAAACGTGTGCC
AGAAGACTTTGAAATTATGACAAGTAATGATTCTGAAATTGTCAAATACACACGTCCTAACTTATCTTCAATCAATCAAC
CAATTTACGATTTGGGTGCCGTTGCTATGCGTATGTTAACTAAAATCATGAACAAAGAAGAATTGGAAGAAAAAGAAATC
ATTCTTAATCATGGTGTGACAAAACGTGCATCAACAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775
  ccpA Streptococcus pneumoniae D39

76.276

100

0.763
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.399

0.562