Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   P3R60_RS03200 Genome accession   NZ_CP120510
Coordinates   648371..649450 (-) Length   359 a.a.
NCBI ID   WP_278025040.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP21-2     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 643371..654450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS03175 - 643405..644349 (-) 945 WP_218654113.1 ABC transporter permease subunit -
  P3R60_RS03180 - 644351..645829 (-) 1479 WP_218654112.1 sugar ABC transporter ATP-binding protein -
  P3R60_RS03185 rbsD 645842..646240 (-) 399 WP_218654111.1 D-ribose pyranase -
  P3R60_RS03190 rbsK 646215..647126 (-) 912 WP_278025041.1 ribokinase -
  P3R60_RS03195 - 647119..648102 (-) 984 WP_218654109.1 LacI family DNA-binding transcriptional regulator -
  P3R60_RS03200 sepM 648371..649450 (-) 1080 WP_278025040.1 SepM family pheromone-processing serine protease Regulator
  P3R60_RS03205 coaD 649431..649931 (-) 501 WP_104967398.1 pantetheine-phosphate adenylyltransferase -
  P3R60_RS03210 rsmD 649921..650460 (-) 540 WP_278025039.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  P3R60_RS03215 - 650549..651457 (+) 909 WP_256866669.1 diacylglycerol kinase family protein -
  P3R60_RS03220 - 651611..652708 (-) 1098 WP_316606634.1 MmcQ/YjbR family DNA-binding protein -
  P3R60_RS03225 - 652752..653267 (-) 516 WP_218654103.1 GNAT family N-acetyltransferase -
  P3R60_RS03230 - 653550..653732 (-) 183 WP_218654102.1 DUF6440 family protein -

Sequence


Protein


Download         Length: 359 a.a.        Molecular weight: 39645.26 Da        Isoelectric Point: 5.3441

>NTDB_id=805842 P3R60_RS03200 WP_278025040.1 648371..649450(-) (sepM) [Streptococcus pluranimalium strain SP21-2]
MNKQEFKVIEENPKKNSPLKWWLLGIGTAILLAVAFFLPLPYYIEMPGGAYDIRDVLEVDDKEDTAKGSYNFVAISQMQA
TPVALLYAWATPFTDISTAKESLGNYTEEEYIRLNQFYMETSQNEAIYQAFKLADKPVDLKYFGVYVLDVAKHSTFKGIL
GLADTVTGVNGKTFESSKELIDYVAKQKIGDKVTVQYLSDGKEKEASGKIIKLDNGKNGIGIGLVDHTEVETKTPVHFST
GNVGGPSAGLMFTLDILDQINEEDLRKGRMIAGTGTIEKDGSVGDIGGADKKVVSAAKDKAEIFFVPNNPLPKSYLKEHP
DAKTNYQEAKEAAKRIKTDMKIIPVKNVQDAIDYLKKTS

Nucleotide


Download         Length: 1080 bp        

>NTDB_id=805842 P3R60_RS03200 WP_278025040.1 648371..649450(-) (sepM) [Streptococcus pluranimalium strain SP21-2]
GTGAACAAACAAGAATTTAAAGTCATTGAGGAAAACCCTAAAAAGAATTCCCCTTTAAAATGGTGGTTACTGGGAATTGG
AACAGCTATATTACTGGCTGTTGCCTTCTTTCTCCCGCTGCCTTATTACATTGAAATGCCTGGGGGAGCCTATGATATTC
GTGATGTTTTAGAGGTTGATGACAAAGAAGATACAGCTAAAGGTTCTTATAATTTTGTCGCGATTTCTCAAATGCAAGCA
ACCCCGGTCGCTTTACTTTATGCTTGGGCAACTCCTTTTACCGATATTTCAACTGCTAAGGAAAGTTTGGGAAATTATAC
CGAAGAGGAGTACATTCGCCTCAATCAGTTTTATATGGAAACGTCACAAAATGAAGCGATCTACCAAGCTTTTAAATTAG
CTGACAAACCTGTAGACTTAAAATACTTCGGTGTTTATGTTTTGGATGTTGCTAAGCACTCTACTTTTAAAGGAATTCTA
GGTTTAGCAGATACTGTTACCGGTGTTAATGGTAAAACCTTTGAAAGTTCTAAGGAACTTATTGATTACGTTGCCAAACA
AAAGATTGGGGATAAGGTGACCGTACAATATTTATCTGATGGCAAAGAAAAAGAAGCTTCTGGTAAAATCATTAAGCTAG
ATAATGGCAAAAATGGAATTGGAATAGGACTCGTAGATCATACCGAAGTTGAAACAAAAACGCCAGTTCATTTTTCAACA
GGCAATGTTGGTGGACCGAGTGCAGGTCTTATGTTTACCTTGGATATTCTAGATCAAATCAATGAAGAAGATTTGAGAAA
AGGACGTATGATTGCAGGTACTGGAACGATTGAAAAAGACGGTTCAGTCGGTGATATTGGTGGTGCGGATAAGAAGGTTG
TTTCAGCAGCTAAAGATAAGGCTGAGATTTTCTTTGTTCCAAACAATCCCCTCCCAAAATCTTATTTAAAAGAACACCCA
GATGCTAAAACCAATTATCAGGAAGCCAAAGAAGCTGCTAAGCGTATCAAGACGGACATGAAAATTATTCCAGTCAAGAA
TGTTCAGGATGCGATTGACTACTTGAAAAAAACGTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.116

95.822

0.624