Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | L6499_RS25490 | Genome accession | NZ_AP022986 |
| Coordinates | 4903392..4903973 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus cereus strain 30052 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4898392..4908973
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6499_RS25455 (BC30052_5072) | - | 4899386..4899592 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| L6499_RS25460 (BC30052_5073) | - | 4899686..4900171 (+) | 486 | WP_061680871.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| L6499_RS25465 (BC30052_5074) | spoVAC | 4900202..4900678 (+) | 477 | WP_061680870.1 | stage V sporulation protein AC | - |
| L6499_RS25470 (BC30052_5075) | spoVAD | 4900679..4901695 (+) | 1017 | WP_000938963.1 | stage V sporulation protein AD | - |
| L6499_RS25475 (BC30052_5076) | spoVAE | 4901692..4902042 (+) | 351 | WP_000575924.1 | stage V sporulation protein AE | - |
| L6499_RS25480 (BC30052_5077) | - | 4902054..4902260 (+) | 207 | WP_000215914.1 | DUF1657 domain-containing protein | - |
| L6499_RS25485 (BC30052_5078) | - | 4902281..4903150 (+) | 870 | WP_000018934.1 | DUF421 domain-containing protein | - |
| L6499_RS25490 (BC30052_5079) | clpP | 4903392..4903973 (+) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| L6499_RS25495 (BC30052_5080) | - | 4904295..4904543 (-) | 249 | WP_000250307.1 | HPr family phosphocarrier protein | - |
| L6499_RS25500 (BC30052_5081) | whiA | 4904567..4905517 (-) | 951 | WP_000006561.1 | DNA-binding protein WhiA | - |
| L6499_RS25505 (BC30052_5082) | - | 4905607..4906560 (-) | 954 | WP_000712177.1 | YvcK family protein | - |
| L6499_RS25510 (BC30052_5083) | rapZ | 4906564..4907445 (-) | 882 | WP_000138464.1 | RNase adapter RapZ | - |
| L6499_RS25515 (BC30052_5084) | - | 4907466..4907924 (-) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
| L6499_RS25520 (BC30052_5085) | - | 4908153..4908959 (-) | 807 | WP_000455203.1 | DUF368 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=80513 L6499_RS25490 WP_001049162.1 4903392..4903973(+) (clpP) [Bacillus cereus strain 30052]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=80513 L6499_RS25490 WP_001049162.1 4903392..4903973(+) (clpP) [Bacillus cereus strain 30052]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCTGAAAAAGATATTCATATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCCGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGTGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATTCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCTGAAAAAGATATTCATATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCCGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGTGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATTCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |