Detailed information NTG0080299

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: L6478_RS13515
• Genome accession: NZ_AP022970
• Coordinates: 2622292..2622873 (-)
• Length: 193 a.a.
• NCBI ID: WP_236788563.1
• Uniprot ID: -
• Organism: Bacillus cereus strain J75
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2617292..2627873

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6478_RS13490 (BCJMU75_2630)	-	2617616..2618452 (-)	837	WP_000557572.1	PP2C family serine/threonine-protein phosphatase	-
L6478_RS13495 (BCJMU75_2631)	-	2618715..2618885 (-)	171	WP_002163622.1	hypothetical protein	-
L6478_RS13500 (BCJMU75_2632)	-	2619183..2620019 (-)	837	WP_001084757.1	proline/glycine betaine ABC transporter permease	-
L6478_RS13505 (BCJMU75_2633)	-	2620012..2621217 (-)	1206	WP_000370609.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
L6478_RS13510 (BCJMU75_2634)	-	2621389..2622246 (+)	858	WP_062921274.1	glycine betaine ABC transporter substrate-binding protein	-
L6478_RS13515 (BCJMU75_2635)	clpP	2622292..2622873 (-)	582	WP_236788563.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
L6478_RS13520 (BCJMU75_2636)	-	2622895..2623581 (-)	687	WP_000337493.1	RNA polymerase subunit sigma-70	-
L6478_RS13525 (BCJMU75_2637)	-	2623725..2624045 (+)	321	WP_001125378.1	2Fe-2S iron-sulfur cluster-binding protein	-
L6478_RS13530 (BCJMU75_2638)	rpiA	2624050..2624712 (+)	663	WP_000364536.1	ribose 5-phosphate isomerase A	-
L6478_RS13535 (BCJMU75_2639)	-	2624820..2625254 (+)	435	WP_236788564.1	GNAT family N-acetyltransferase	-
L6478_RS13540 (BCJMU75_2640)	-	2625385..2626752 (-)	1368	WP_236788573.1	lytic polysaccharide monooxygenase	-
L6478_RS13545 (BCJMU75_2641)	-	2627189..2627707 (-)	519	WP_000720568.1	DNA topology modulation protein	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21192.49 Da
• Isoelectric Point: 5.3394

>NTDB_id=80299 L6478_RS13515 WP_236788563.1 2622292..2622873(-) (clpP) [Bacillus cereus strain J75]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDIVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=80299 L6478_RS13515 WP_236788563.1 2622292..2622873(-) (clpP) [Bacillus cereus strain J75]
ATGAATGCAATTCCATATGTTGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
TCGTATTGTTATTATCGGTTCAGAAATAAATGATCAAGTAGCAAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCAGGCGGATCAACGACAGCAGGTTTTGCTATATTAGATACG
ATGAATTTAATCAAACCCGACGTGCAAACGCTATGCATGGGATTTGCAGCATCATTTGGTGCATTGTTATTATTATCAGG
TGCAAAAGGAAAACGATTTGCACTCCCAAATAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCAAAAGGGCAAGCGA
CGGAAATTGAAATCACAGCAAAAAGAATTTTAAAGTTAAAACATGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGATATTGTTACGAAAAAATAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.063	98.964	0.674
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.138	97.927	0.648
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus pneumoniae R6	55.208	99.482	0.549
clpP	Streptococcus pneumoniae TIGR4	55.208	99.482	0.549
clpP	Streptococcus pneumoniae Rx1	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMG 18311	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMD-9	55.208	99.482	0.549
clpP	Streptococcus pneumoniae D39	55.208	99.482	0.549
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	51.852	97.927	0.508
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.265	97.927	0.492