Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | L6484_RS26350 | Genome accession | NZ_AP022964 |
| Coordinates | 5092488..5093069 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus cereus strain J62 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5087488..5098069
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6484_RS26315 (BCJMU62_5234) | - | 5088484..5088690 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| L6484_RS26320 (BCJMU62_5235) | - | 5088784..5089269 (+) | 486 | WP_001228547.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| L6484_RS26325 (BCJMU62_5236) | spoVAC | 5089300..5089776 (+) | 477 | WP_000095399.1 | stage V sporulation protein AC | - |
| L6484_RS26330 (BCJMU62_5237) | spoVAD | 5089777..5090793 (+) | 1017 | WP_000938963.1 | stage V sporulation protein AD | - |
| L6484_RS26335 (BCJMU62_5238) | spoVAE | 5090790..5091140 (+) | 351 | WP_000575924.1 | stage V sporulation protein AE | - |
| L6484_RS26340 (BCJMU62_5239) | - | 5091150..5091356 (+) | 207 | WP_000215901.1 | DUF1657 domain-containing protein | - |
| L6484_RS26345 (BCJMU62_5240) | - | 5091377..5092246 (+) | 870 | WP_236801497.1 | DUF421 domain-containing protein | - |
| L6484_RS26350 (BCJMU62_5241) | clpP | 5092488..5093069 (+) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| L6484_RS26355 (BCJMU62_5242) | - | 5093394..5093642 (-) | 249 | WP_000250307.1 | HPr family phosphocarrier protein | - |
| L6484_RS26360 (BCJMU62_5243) | whiA | 5093666..5094616 (-) | 951 | WP_000006561.1 | DNA-binding protein WhiA | - |
| L6484_RS26365 (BCJMU62_5244) | - | 5094706..5095659 (-) | 954 | WP_000712177.1 | YvcK family protein | - |
| L6484_RS26370 (BCJMU62_5245) | rapZ | 5095663..5096544 (-) | 882 | WP_000138464.1 | RNase adapter RapZ | - |
| L6484_RS26375 (BCJMU62_5246) | - | 5096565..5097023 (-) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
| L6484_RS26380 (BCJMU62_5247) | - | 5097252..5098058 (-) | 807 | WP_000455203.1 | DUF368 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=80267 L6484_RS26350 WP_001049162.1 5092488..5093069(+) (clpP) [Bacillus cereus strain J62]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=80267 L6484_RS26350 WP_001049162.1 5092488..5093069(+) (clpP) [Bacillus cereus strain J62]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCTGAAAAAGATATTCATATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGTGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATTCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCTGAAAAAGATATTCATATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGTGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATTCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |