Detailed information NTG0801213

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: P3F89_RS13765
• Genome accession: NZ_CP119875
• Coordinates: 2652762..2653343 (+)
• Length: 193 a.a.
• NCBI ID: WP_000991609.1
• Uniprot ID: A0A853X8N5
• Organism: Bacillus tropicus strain T36S-23
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2647762..2658343

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3F89_RS13740 (P3F89_13720)	-	2648883..2650250 (+)	1368	WP_097996128.1	lytic polysaccharide monooxygenase	-
P3F89_RS13745 (P3F89_13725)	-	2650381..2650815 (-)	435	Protein_2722	GNAT family N-acetyltransferase	-
P3F89_RS13750 (P3F89_13730)	rpiA	2650922..2651584 (-)	663	WP_042515003.1	ribose 5-phosphate isomerase A	-
P3F89_RS13755 (P3F89_13735)	-	2651589..2651909 (-)	321	WP_001125390.1	2Fe-2S iron-sulfur cluster-binding protein	-
P3F89_RS13760 (P3F89_13740)	-	2652054..2652740 (+)	687	WP_042515005.1	RNA polymerase subunit sigma-70	-
P3F89_RS13765 (P3F89_13745)	clpP	2652762..2653343 (+)	582	WP_000991609.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
P3F89_RS13770 (P3F89_13750)	-	2653390..2654247 (-)	858	WP_042515006.1	glycine betaine ABC transporter substrate-binding protein	-
P3F89_RS13775 (P3F89_13755)	-	2654419..2655624 (+)	1206	WP_000370618.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
P3F89_RS13780 (P3F89_13760)	-	2655617..2656453 (+)	837	WP_001084764.1	proline/glycine betaine ABC transporter permease	-
P3F89_RS13785 (P3F89_13765)	-	2656751..2656918 (+)	168	WP_002194804.1	hypothetical protein	-
P3F89_RS13790 (P3F89_13770)	-	2657018..2657509 (+)	492	WP_002021523.1	HIT family protein	-
P3F89_RS13795 (P3F89_13775)	-	2657493..2658329 (+)	837	WP_033691750.1	PP2C family serine/threonine-protein phosphatase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21192.49 Da
• Isoelectric Point: 5.3394

>NTDB_id=801213 P3F89_RS13765 WP_000991609.1 2652762..2653343(+) (clpP) [Bacillus tropicus strain T36S-23]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAKGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=801213 P3F89_RS13765 WP_000991609.1 2652762..2653343(+) (clpP) [Bacillus tropicus strain T36S-23]
ATGAATGCAATTCCATATGTTGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGTATTATTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCCGGCGGATCAACGACAGCGGGATTTGCTATATTAGATACA
ATGAATTTAATTAAACCTGATGTGCAAACGCTATGCATGGGCTTTGCAGCATCATTTGGTGCATTGTTATTATTATCAGG
TGCAAAAGGAAAACGATTTGCACTCCCAAATAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCAAAAGGGCAGGCAA
CAGAAATTGAAATAACAGCAAAAAGGATATTGAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACCGCAGAAGAAGCAAAGGCATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.063	98.964	0.674
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.196	97.927	0.658
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus pneumoniae R6	55.208	99.482	0.549
clpP	Streptococcus pneumoniae TIGR4	55.208	99.482	0.549
clpP	Streptococcus pneumoniae Rx1	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMG 18311	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMD-9	55.208	99.482	0.549
clpP	Streptococcus pneumoniae D39	55.208	99.482	0.549
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	51.852	97.927	0.508
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.265	97.927	0.492