Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | PY368_RS10980 | Genome accession | NZ_CP119764 |
| Coordinates | 2300560..2300880 (-) | Length | 106 a.a. |
| NCBI ID | WP_017410999.1 | Uniprot ID | A0A1V2F1S1 |
| Organism | Aeromonas hydrophila strain 516 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2295560..2305880
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PY368_RS10960 (PY368_10960) | - | 2295881..2296558 (-) | 678 | WP_135319052.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| PY368_RS10965 (PY368_10965) | - | 2296899..2297870 (+) | 972 | WP_135319053.1 | response regulator | - |
| PY368_RS10970 (PY368_10970) | - | 2297943..2299340 (-) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| PY368_RS10975 (PY368_10975) | galU | 2299554..2300465 (-) | 912 | WP_029305299.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| PY368_RS10980 (PY368_10980) | comEA | 2300560..2300880 (-) | 321 | WP_017410999.1 | ComEA family DNA-binding protein | Machinery gene |
| PY368_RS10985 (PY368_10985) | cysQ | 2301109..2301819 (+) | 711 | WP_276198941.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| PY368_RS10990 (PY368_10990) | - | 2301900..2302196 (-) | 297 | WP_135319055.1 | YciI family protein | - |
| PY368_RS10995 (PY368_10995) | - | 2302222..2302773 (-) | 552 | WP_024946223.1 | septation protein A | - |
| PY368_RS11000 (PY368_11000) | - | 2302878..2304383 (-) | 1506 | WP_135319056.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| PY368_RS11005 (PY368_11005) | - | 2304608..2305243 (+) | 636 | WP_016351856.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11210.05 Da Isoelectric Point: 9.5773
>NTDB_id=801069 PY368_RS10980 WP_017410999.1 2300560..2300880(-) (comEA) [Aeromonas hydrophila strain 516]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTANINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTANINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=801069 PY368_RS10980 WP_017410999.1 2300560..2300880(-) (comEA) [Aeromonas hydrophila strain 516]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAATATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCCCAGGCCATCGTCGATTACCGTGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTGAACACCGCCAATATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCCCAGGCCATCGTCGATTACCGTGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
52.727 |
100 |
0.547 |
| comEA | Vibrio cholerae strain A1552 |
52.727 |
100 |
0.547 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.918 |
92.453 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
62.319 |
65.094 |
0.406 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
38.235 |
96.226 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
38.235 |
96.226 |
0.368 |