Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   P1I87_RS08445 Genome accession   NZ_CP119576
Coordinates   1653977..1654156 (-) Length   59 a.a.
NCBI ID   WP_000965641.1    Uniprot ID   A0AAW3HVR2
Organism   Streptococcus agalactiae strain Guangzhou-SAG092     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1648977..1659156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1I87_RS08420 (P1I87_08420) - 1649258..1650535 (-) 1278 WP_000594360.1 ABC transporter permease -
  P1I87_RS08425 (P1I87_08425) - 1651277..1651438 (+) 162 WP_000508795.1 NINE protein -
  P1I87_RS08430 (P1I87_08430) - 1651611..1652973 (-) 1363 Protein_1588 IS3 family transposase -
  P1I87_RS08435 (P1I87_08435) - 1652994..1653260 (+) 267 WP_001872365.1 hypothetical protein -
  P1I87_RS08440 (P1I87_08440) - 1653296..1653877 (+) 582 WP_025193995.1 site-specific integrase -
  P1I87_RS08445 (P1I87_08445) prx 1653977..1654156 (-) 180 WP_000965641.1 hypothetical protein Regulator
  P1I87_RS08450 (P1I87_08450) - 1654574..1654744 (+) 171 WP_000356856.1 hypothetical protein -
  P1I87_RS08455 (P1I87_08455) - 1654785..1654985 (-) 201 WP_000076712.1 CsbD family protein -
  P1I87_RS08460 (P1I87_08460) - 1655095..1655394 (-) 300 WP_000258211.1 STAS-like domain-containing protein -
  P1I87_RS08465 (P1I87_08465) - 1655388..1656284 (-) 897 WP_001061853.1 sensor histidine kinase -
  P1I87_RS08470 (P1I87_08470) - 1656419..1657750 (-) 1332 WP_000257237.1 GH25 family lysozyme -
  P1I87_RS08475 (P1I87_08475) - 1657876..1658130 (-) 255 WP_000611524.1 phage holin -
  P1I87_RS08480 (P1I87_08480) - 1658132..1658434 (-) 303 WP_000215499.1 hypothetical protein -
  P1I87_RS08485 (P1I87_08485) - 1658447..1658659 (-) 213 WP_000698337.1 hypothetical protein -
  P1I87_RS08490 (P1I87_08490) - 1658634..1658960 (-) 327 WP_000404431.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6943.91 Da        Isoelectric Point: 4.4354

>NTDB_id=799750 P1I87_RS08445 WP_000965641.1 1653977..1654156(-) (prx) [Streptococcus agalactiae strain Guangzhou-SAG092]
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPHEEVRDDEVVTVERVEDVMRELR

Nucleotide


Download         Length: 180 bp        

>NTDB_id=799750 P1I87_RS08445 WP_000965641.1 1653977..1654156(-) (prx) [Streptococcus agalactiae strain Guangzhou-SAG092]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTGCCGCACGAGGAAGTGAGAGATGATGAAGTTGTGACAGTTGAGAGAGTGGAAGACG
TTATGAGAGAATTGAGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

74.138

98.305

0.729
  prx Streptococcus pyogenes MGAS8232

70.69

98.305

0.695
  prx Streptococcus pyogenes MGAS315

70.69

98.305

0.695
  prx Streptococcus pyogenes MGAS315

93.023

72.881

0.678
  prx Streptococcus pyogenes MGAS315

63.793

98.305

0.627
  prx Streptococcus pyogenes MGAS315

78.049

69.492

0.542
  prx Streptococcus pyogenes MGAS315

76.19

71.186

0.542