Detailed information NTG0798214

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: PY247_RS07100
• Genome accession: NZ_CP119223
• Coordinates: 1504250..1505308 (+)
• Length: 352 a.a.
• NCBI ID: WP_004657415.1
• Uniprot ID: A0A1E7R2K5
• Organism: Acinetobacter proteolyticus strain AP54
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1499250..1510308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PY247_RS07085 (PY247_07085)	mraY	1499473..1500591 (+)	1119	WP_275573865.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
PY247_RS07090 (PY247_07090)	-	1500650..1501498 (+)	849	WP_275573866.1	methyltransferase domain-containing protein	-
PY247_RS07095 (PY247_07095)	ponA	1501482..1504086 (-)	2605	Protein_1369	penicillin-binding protein PBP1a	-
PY247_RS07100 (PY247_07100)	comM	1504250..1505308 (+)	1059	WP_004657415.1	pilus assembly protein PilM	Machinery gene
PY247_RS07105 (PY247_07105)	pilN	1505308..1505958 (+)	651	WP_159723954.1	PilN domain-containing protein	Machinery gene
PY247_RS07110 (PY247_07110)	-	1505955..1506681 (+)	727	Protein_1372	type 4a pilus biogenesis protein PilO	-
PY247_RS07115 (PY247_07115)	pilP	1506685..1507212 (+)	528	WP_159723956.1	pilus assembly protein PilP	Machinery gene
PY247_RS07120 (PY247_07120)	pilQ	1507229..1509406 (+)	2178	WP_159723957.1	type IV pilus secretin PilQ	Machinery gene
PY247_RS07125 (PY247_07125)	aroK	1509426..1509983 (+)	558	WP_004657425.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39037.71 Da
• Isoelectric Point: 4.5488

>NTDB_id=798214 PY247_RS07100 WP_004657415.1 1504250..1505308(+) (comM) [Acinetobacter proteolyticus strain AP54]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYAVMPLPESSVVEKSILNPEAVGDALERVVNLANPHTTNVAI
AVPTSMVINKIIEMDADMTDEEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVDTRVEVLEL
AGLTAKIAEVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDVQSRYGLSFEE
AGRAKKERTLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSSQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=798214 PY247_RS07100 WP_004657415.1 1504250..1505308(+) (comM) [Acinetobacter proteolyticus strain AP54]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGTGTCGATATTAGTTCGACAACTGTTAAGTTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGTTATGCAGTGATGCCATTGCCTGAAAGCAGTGTCGTGGAAAAAAGCA
TACTGAATCCAGAGGCGGTAGGTGATGCGCTTGAGAGAGTGGTCAACCTTGCCAATCCTCACACCACCAATGTCGCGATT
GCAGTGCCAACATCGATGGTCATTAACAAGATCATTGAGATGGATGCTGACATGACGGATGAAGAGCGTGAAGTTCAAAT
CCGTATGGACGCTGAGCAATACATTCCGTTCCCATTAGATGAAGTCAGTCTTGATTTTGAAGTTTTGCCTGATCGCTTAG
CGAATCCAAATCGGGTCAATGTACTCTTGGTTGCAACACGTACCGAGAATGTCGATACGCGTGTTGAAGTTTTGGAACTG
GCGGGCTTAACAGCAAAAATTGCAGAAGTTGAAAGCTATGCCATGGAGCGTGCATTCAGTGTATTTGCTGATACCTTGCC
AATGGGTGCCAATACGGTGGGGATCTTAGATATTGGTCATACCATGACCACCTTGTCGGTAATGCAAAAAGGCAAGATCA
TTTATACGCGTGAGCAAGTGTTTGGTGGTCGTCAACTGACTCAAGATGTACAGAGTCGTTATGGTCTTTCTTTTGAAGAA
GCGGGGCGTGCCAAGAAAGAACGCACCTTACCAGATGATTACGACACCGAAGTCCTCGAGCCTTTCTTGGATGCAGTGGT
TCAACAGGCGGCACGTTCGCTCCAGTTCTTCTTTTCATCTTCACAATTCAATGAAATTGACCATATTTTGTTGGCGGGCG
GGAATGCCAATATTCCAGGTCTAGCCAAGTTATTACAACAAAAGCTCGGTTATCGGGTCACCATTGCCAATCCATTTCTG
CAAATGGGTTTTTCTTCTCAAATTGATATTAAAAAAATTGAAAACGATGCTTCCTCTTTGATGGTGGCATGTGGTTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A1E7R2K5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	87.784	100	0.878
pilM	Acinetobacter baumannii D1279779	87.5	100	0.875
comM	Acinetobacter baylyi ADP1	82.386	100	0.824
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423