Detailed information NTG0798065

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: PY824_RS08870
• Genome accession: NZ_CP119172
• Coordinates: 1693685..1694275 (-)
• Length: 196 a.a.
• NCBI ID: WP_014295097.1
• Uniprot ID: A0A081JFZ1
• Organism: Streptococcus macedonicus strain SGM CIP105683
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1688685..1699275

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PY824_RS08840 (PY824_08840)	-	1688951..1689715 (-)	765	WP_115265900.1	ABC transporter ATP-binding protein	-
PY824_RS08845 (PY824_08845)	-	1689715..1690668 (-)	954	WP_014295093.1	branched-chain amino acid ABC transporter permease	-
PY824_RS08850 (PY824_08850)	-	1690672..1691556 (-)	885	WP_014295094.1	branched-chain amino acid ABC transporter permease	-
PY824_RS08855 (PY824_08855)	-	1691608..1692789 (-)	1182	WP_115265901.1	ABC transporter substrate-binding protein	-
PY824_RS08860 (PY824_08860)	-	1692902..1693153 (-)	252	WP_009854761.1	YlbG family protein	-
PY824_RS08865 (PY824_08865)	-	1693250..1693588 (-)	339	Protein_1686	YlbF family regulator	-
PY824_RS08870 (PY824_08870)	clpP	1693685..1694275 (-)	591	WP_014295097.1	ATP-dependent Clp protease proteolytic subunit	Regulator
PY824_RS08875 (PY824_08875)	-	1694407..1695300 (-)	894	WP_014295098.1	DMT family transporter	-
PY824_RS08880 (PY824_08880)	-	1695413..1696282 (+)	870	WP_014295099.1	LysR family transcriptional regulator	-
PY824_RS08885 (PY824_08885)	upp	1696348..1696977 (-)	630	WP_014295100.1	uracil phosphoribosyltransferase	-
PY824_RS08890 (PY824_08890)	-	1697136..1698299 (-)	1164	WP_014295101.1	MalY/PatB family protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21548.54 Da
• Isoelectric Point: 4.4901

>NTDB_id=798065 PY824_RS08870 WP_014295097.1 1693685..1694275(-) (clpP) [Streptococcus macedonicus strain SGM CIP105683]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKIRHNLEQILANNSGQ
TFEKVHADAERDNWMSAQETLEYGFIDEIMVNNELN

Nucleotide

• Length: 591 bp

>NTDB_id=798065 PY824_RS08870 WP_014295097.1 1693685..1694275(-) (clpP) [Streptococcus macedonicus strain SGM CIP105683]
ATGATTCCCGTAGTTATTGAACAAACGAGCCGTGGTGAACGCTCATATGATATTTATTCACGCCTTTTGAAAGACCGTAT
TATCATGTTGACTGGACCAGTTGAAGATAATATGGCTAACTCTATCATTGCCCAATTGTTGTTCCTTGATGCACAAGATA
ACACTAAAGATATTTACCTTTATGTTAATACTCCTGGTGGTTCAGTATCAGCAGGACTTGCCATTGTTGATACAATGAAT
TTCATTAAATCAGATGTTCAAACAATTGTTATGGGTATGGCAGCTTCAATGGGAACTGTTATTGCGTCATCAGGTGCAAA
AGGTAAACGTTTCATGTTGCCAAATGCTGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACACAACAAA
CAGATATGGCAATTGCTGCCGAACACCTTTTGAAAATACGTCACAACTTGGAACAAATTTTGGCTAACAACTCTGGTCAA
ACATTTGAAAAAGTTCACGCTGACGCCGAACGTGATAACTGGATGAGTGCACAAGAAACCCTCGAATACGGCTTCATCGA
CGAAATCATGGTAAACAACGAATTAAACTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

3D structure

• AlphaFold DB: A0A081JFZ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	93.878	100	0.939
clpP	Streptococcus pneumoniae D39	93.878	100	0.939
clpP	Streptococcus pneumoniae R6	93.878	100	0.939
clpP	Streptococcus pneumoniae TIGR4	93.878	100	0.939
clpP	Streptococcus thermophilus LMG 18311	94.359	99.49	0.939
clpP	Streptococcus thermophilus LMD-9	94.359	99.49	0.939
clpP	Streptococcus pyogenes JRS4	90.306	100	0.903
clpP	Streptococcus pyogenes MGAS315	90.306	100	0.903
clpP	Streptococcus mutans UA159	87.245	100	0.872
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.204	100	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	84.694	100	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.474	96.939	0.577
clpP	Bacillus subtilis subsp. subtilis str. 168	58.247	98.98	0.577