Detailed information NTG0796854

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QU709_RS43115
• Genome accession: NZ_CP132593
• Coordinates: 9673689..9674291 (-)
• Length: 200 a.a.
• NCBI ID: WP_306503893.1
• Uniprot ID: -
• Organism: Streptomyces sp. YU58 strain SX92
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 9668689..9679291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QU709_RS43090 (QU709_43105)	-	9669324..9670589 (+)	1266	WP_306503889.1	DUF6777 domain-containing protein	-
QU709_RS43095 (QU709_43110)	-	9670687..9671145 (+)	459	WP_306503890.1	ATP-binding protein	-
QU709_RS43100 (QU709_43115)	-	9671241..9672131 (-)	891	WP_232032567.1	RNA polymerase sigma factor SigF	-
QU709_RS43105 (QU709_43120)	-	9672355..9673128 (-)	774	WP_306503891.1	class I SAM-dependent methyltransferase	-
QU709_RS43110 (QU709_43125)	-	9673217..9673666 (+)	450	WP_306503892.1	helix-turn-helix domain-containing protein	-
QU709_RS43115 (QU709_43130)	clpP	9673689..9674291 (-)	603	WP_306503893.1	ClpP family protease	Regulator
QU709_RS43120 (QU709_43135)	clpP	9674293..9674931 (-)	639	WP_306503894.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QU709_RS43125 (QU709_43140)	-	9675055..9676260 (-)	1206	WP_306503895.1	epoxide hydrolase family protein	-
QU709_RS43130 (QU709_43145)	-	9676395..9676877 (+)	483	WP_306503896.1	VOC family protein	-
QU709_RS43135 (QU709_43150)	-	9676932..9677807 (-)	876	WP_306503897.1	aminoglycoside phosphotransferase family protein	-
QU709_RS43140 (QU709_43155)	-	9677871..9678794 (-)	924	WP_306503898.1	SGNH/GDSL hydrolase family protein	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 21606.66 Da
• Isoelectric Point: 5.2745

>NTDB_id=796854 QU709_RS43115 WP_306503893.1 9673689..9674291(-) (clpP) [Streptomyces sp. YU58 strain SX92]
MANYTIPYVVERTAHGERSSDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSAPESEISVYINSPGGSFTSLMAIY
DTMSYVKAPISTCCVGQAASTAAVLLAGGDPGRRFVLEHARVLLGQPASGGSRGMISDLALQAKEMVRIRGQVEEVLARH
THHDIATLRADMDRDKVFTAEEAVAYGLADEVLSRRLVMV

Nucleotide

• Length: 603 bp

>NTDB_id=796854 QU709_RS43115 WP_306503893.1 9673689..9674291(-) (clpP) [Streptomyces sp. YU58 strain SX92]
ATGGCGAACTACACGATTCCGTACGTCGTCGAGCGGACCGCGCACGGCGAGCGGTCCTCCGACGTGTTCAGCCGGCTGCT
CTCCGAACGGATCATCTTCCTCGGCACCGAGATCGACGACGGGGTGGCCAACGTCGTGATCGCGCAGCTGCTGCATCTGG
AGTCGTCGGCGCCGGAGAGCGAGATCTCGGTGTACATCAACTCCCCCGGCGGCTCGTTCACCTCGCTGATGGCGATCTAC
GACACGATGTCGTACGTCAAGGCGCCGATCTCGACGTGCTGCGTCGGCCAGGCGGCCTCCACGGCGGCCGTCCTGCTGGC
CGGCGGGGATCCGGGGCGGCGGTTCGTGCTGGAACACGCGCGGGTGCTGCTCGGCCAGCCGGCCAGCGGCGGCAGCCGCG
GCATGATCTCCGACCTCGCCCTCCAGGCCAAGGAGATGGTGCGGATCCGTGGTCAGGTCGAGGAGGTGCTCGCCCGCCAC
ACCCACCACGACATCGCGACGCTGCGCGCGGACATGGACCGCGACAAGGTGTTCACCGCGGAGGAGGCGGTGGCGTACGG
GCTGGCCGACGAGGTGCTCAGCCGGCGCCTCGTGATGGTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (15-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.148	94.5	0.455
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.368	95	0.45
clpP	Streptococcus pyogenes JRS4	39.583	96	0.38
clpP	Streptococcus pyogenes MGAS315	39.583	96	0.38
clpP	Streptococcus pneumoniae D39	38.542	96	0.37
clpP	Streptococcus pneumoniae Rx1	38.542	96	0.37
clpP	Streptococcus pneumoniae R6	38.542	96	0.37
clpP	Streptococcus pneumoniae TIGR4	38.542	96	0.37
clpP	Streptococcus mutans UA159	39.153	94.5	0.37
clpP	Streptococcus thermophilus LMG 18311	37.5	96	0.36
clpP	Streptococcus thermophilus LMD-9	37.5	96	0.36