Detailed information NTG0794634

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: PXH68_RS06025
• Genome accession: NZ_CP118733
• Coordinates: 1289173..1289760 (-)
• Length: 195 a.a.
• NCBI ID: WP_158457104.1
• Uniprot ID: A0AA96VC09
• Organism: Streptococcus suivaginalis strain 29896
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1284173..1294760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PXH68_RS06000 (PXH68_06000)	-	1284800..1285564 (-)	765	WP_158457094.1	ABC transporter ATP-binding protein	-
PXH68_RS06005 (PXH68_06005)	-	1285564..1286514 (-)	951	WP_248028465.1	branched-chain amino acid ABC transporter permease	-
PXH68_RS06010 (PXH68_06010)	-	1286517..1287404 (-)	888	WP_205031291.1	branched-chain amino acid ABC transporter permease	-
PXH68_RS06015 (PXH68_06015)	-	1287553..1288725 (-)	1173	WP_205031292.1	ABC transporter substrate-binding protein	-
PXH68_RS06020 (PXH68_06020)	-	1288815..1289087 (-)	273	WP_205031293.1	DUF2129 domain-containing protein	-
PXH68_RS06025 (PXH68_06025)	clpP	1289173..1289760 (-)	588	WP_158457104.1	ATP-dependent Clp protease proteolytic subunit	Regulator
PXH68_RS06030 (PXH68_06030)	upp	1289898..1290527 (-)	630	WP_158457206.1	uracil phosphoribosyltransferase	-
PXH68_RS06035 (PXH68_06035)	-	1290608..1291777 (-)	1170	WP_248028466.1	MalY/PatB family protein	-
PXH68_RS06040 (PXH68_06040)	-	1291767..1292870 (-)	1104	WP_248028467.1	cystathionine gamma-synthase	-
PXH68_RS06045 (PXH68_06045)	-	1293352..1293633 (+)	282	WP_248028468.1	hypothetical protein	-
PXH68_RS06050 (PXH68_06050)	-	1293766..1293912 (+)	147	WP_248028469.1	hypothetical protein	-
PXH68_RS06055 (PXH68_06055)	-	1293922..1294173 (+)	252	WP_248028470.1	hypothetical protein	-

Sequence

Protein

• Length: 195 a.a.
• Molecular weight: 21382.62 Da
• Isoelectric Point: 5.2668

>NTDB_id=794634 PXH68_RS06025 WP_158457104.1 1289173..1289760(-) (clpP) [Streptococcus suivaginalis strain 29896]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGTAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEQILADNSGK
SVKQIHKDAERDYWMTAEETLAYGFIDQIMDKMAK

Nucleotide

• Length: 588 bp

>NTDB_id=794634 PXH68_RS06025 WP_158457104.1 1289173..1289760(-) (clpP) [Streptococcus suivaginalis strain 29896]
ATGATTCCAGTAGTAATTGAACAAACCAGCCGTGGTGAACGTTCTTATGACATTTACTCTCGCTTGCTCAAGGACCGCAT
CATCATGTTGACAGGTCCAGTTGAAGATAACATGGCAAATTCTATCATTGCCCAATTGCTTTTCTTAGATGCTCAAGACC
CAACTAAGGATATCTATCTCTATGTCAACACTCCTGGTGGTTCTGTATCAGCAGGTCTGGCGATTGTGGATACCATGAAC
TTTATTAAAGCAGATGTTCAGACTATCGTGATGGGAACTGCAGCTAGCATGGGAACGATCATTGCATCAAGCGGTGCCAA
AGGCAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAGCCTATGGGTGGAACAGGTGGCGGTACCCAACAGA
CAGATATGGCGATTGCGGCGGAGCACTTGCTCAAAACTCGTAACAAGTTGGAGCAAATTCTTGCTGATAATTCAGGTAAA
TCTGTCAAACAAATCCACAAAGACGCAGAGCGCGATTACTGGATGACTGCGGAAGAAACCTTGGCATATGGATTCATTGA
TCAGATCATGGATAAGATGGCAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	92.147	97.949	0.903
clpP	Streptococcus pyogenes JRS4	92.147	97.949	0.903
clpP	Streptococcus mutans UA159	90.576	97.949	0.887
clpP	Streptococcus pneumoniae R6	90.526	97.436	0.882
clpP	Streptococcus pneumoniae Rx1	90.526	97.436	0.882
clpP	Streptococcus pneumoniae D39	90.526	97.436	0.882
clpP	Streptococcus pneumoniae TIGR4	90.526	97.436	0.882
clpP	Streptococcus thermophilus LMG 18311	90.526	97.436	0.882
clpP	Streptococcus thermophilus LMD-9	90.526	97.436	0.882
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.387	97.949	0.846
clpP	Lactococcus lactis subsp. cremoris KW2	85.864	97.949	0.841
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.462	100	0.585
clpP	Bacillus subtilis subsp. subtilis str. 168	57.895	97.436	0.564