Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   PVK54_RS08180 Genome accession   NZ_CP118312
Coordinates   1589274..1589456 (-) Length   60 a.a.
NCBI ID   WP_228636946.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 20181688     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1584274..1594456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVK54_RS08165 (PVK54_08125) - 1584547..1585008 (-) 462 WP_002988493.1 deaminase -
  PVK54_RS08170 (PVK54_08130) - 1585043..1586116 (-) 1074 WP_002988490.1 Xaa-Pro peptidase family protein -
  PVK54_RS08175 (PVK54_08135) uvrA 1586232..1589060 (-) 2829 WP_021340890.1 excinuclease ABC subunit UvrA -
  PVK54_RS08180 (PVK54_08140) prx 1589274..1589456 (-) 183 WP_228636946.1 Paratox Regulator
  PVK54_RS08185 (PVK54_08145) - 1589689..1590675 (+) 987 WP_011106647.1 DNA/RNA non-specific endonuclease -
  PVK54_RS08190 (PVK54_08150) - 1590789..1591304 (-) 516 WP_023077389.1 hypothetical protein -
  PVK54_RS08195 (PVK54_08155) - 1591626..1592828 (-) 1203 WP_011054730.1 glucosaminidase domain-containing protein -
  PVK54_RS08200 (PVK54_08160) - 1592945..1593172 (-) 228 WP_000609113.1 phage holin -
  PVK54_RS08205 (PVK54_08165) - 1593169..1593444 (-) 276 WP_002987582.1 hypothetical protein -
  PVK54_RS08210 (PVK54_08170) - 1593454..1594071 (-) 618 WP_032461328.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6897.83 Da        Isoelectric Point: 4.2542

>NTDB_id=791819 PVK54_RS08180 WP_228636946.1 1589274..1589456(-) (prx) [Streptococcus pyogenes strain 20181688]
MLTYDEFKQAIDHGYITGDTVAIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=791819 PVK54_RS08180 WP_228636946.1 1589274..1589456(-) (prx) [Streptococcus pyogenes strain 20181688]
ATGCTAACATACGACGAATTTAAGCAAGCAATCGACCATGGGTATATCACAGGAGACACAGTAGCGATTGTGCGCAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

86.047

71.667

0.617