Detailed information NTG0780160

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: PNF30_RS03185
• Genome accession: NZ_CP116774
• Coordinates: 652861..653457 (-)
• Length: 198 a.a.
• NCBI ID: WP_024427684.1
• Uniprot ID: -
• Organism: Bacillus safensis strain SRCM125915
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 647861..658457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PNF30_RS03160 (PNF30_03160)	-	647945..648922 (-)	978	WP_111292206.1	2-hydroxyacid dehydrogenase	-
PNF30_RS03165 (PNF30_03165)	-	649476..650057 (+)	582	WP_095409623.1	beta-class carbonic anhydrase	-
PNF30_RS03170 (PNF30_03170)	-	650096..651718 (+)	1623	WP_039181629.1	SulP family inorganic anion transporter	-
PNF30_RS03175 (PNF30_03175)	-	651745..652086 (-)	342	WP_095409622.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
PNF30_RS03180 (PNF30_03180)	-	652222..652800 (+)	579	WP_095409621.1	TIGR00730 family Rossman fold protein	-
PNF30_RS03185 (PNF30_03185)	clpP	652861..653457 (-)	597	WP_024427684.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
PNF30_RS03195 (PNF30_03195)	-	654357..654533 (+)	177	WP_223251027.1	hypothetical protein	-
PNF30_RS03200 (PNF30_03200)	-	654529..654627 (+)	99	WP_263640238.1	hypothetical protein	-
PNF30_RS03205 (PNF30_03205)	-	655038..655847 (+)	810	WP_095409620.1	DUF6270 domain-containing protein	-
PNF30_RS03215 (PNF30_03215)	-	656536..657702 (+)	1167	WP_272510703.1	macrolide family glycosyltransferase	-
PNF30_RS03220 (PNF30_03220)	-	657875..658030 (-)	156	WP_272510704.1	hypothetical protein	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.00 Da
• Isoelectric Point: 4.6835

>NTDB_id=780160 PNF30_RS03185 WP_024427684.1 652861..653457(-) (clpP) [Bacillus safensis strain SRCM125915]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK

Nucleotide

• Length: 597 bp

>NTDB_id=780160 PNF30_RS03185 WP_024427684.1 652861..653457(-) (clpP) [Bacillus safensis strain SRCM125915]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTCGGCGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.939	100	0.939
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53