Detailed information NTG0778765

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PHA78_RS05115
• Genome accession: NZ_CP116604
• Coordinates: 1036537..1037379 (+)
• Length: 280 a.a.
• NCBI ID: WP_024376240.1
• Uniprot ID: -
• Organism: Streptococcus sp. HN38
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1035330..1035827	1036537..1037379	flank	710

Gene organization within MGE regions

Location: 1035330..1037379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PHA78_RS05105	-	1035869..1035870 (-)	2	WP_099778716.1	IS630 family transposase	-
PHA78_RS05110	-	1036403..1036480 (+)	78	Protein_962	sugar O-acetyltransferase	-
PHA78_RS05115	dprA	1036537..1037379 (+)	843	WP_024376240.1	DNA-processing protein DprA	Machinery gene

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31272.22 Da
• Isoelectric Point: 8.4498

>NTDB_id=778765 PHA78_RS05115 WP_024376240.1 1036537..1037379(+) (dprA) [Streptococcus sp. HN38]
MNNFELFKWKKAGLTNLNINKVLAYQDLHGKKLTLRNIAVVSECKNPVLFMENYKNLDIKSCREEFNKFPSFSILDDIYP
LALKQIYNPPVLLFYQGDLELLEKSKLAVVGTRNASKNGIQSVQKIIKELNNRFVIVSGLARGIDTAAHIASLKNGGQTI
AVIGTGLDKIYPKENKDLQTYIGKHHLVLTEYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGR
EVYAIPGSIMDGKSDGCHHLIQEGAKCVTSGLDIISEYQF

Nucleotide

• Length: 843 bp

>NTDB_id=778765 PHA78_RS05115 WP_024376240.1 1036537..1037379(+) (dprA) [Streptococcus sp. HN38]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGTTTGACCAATCTTAATATTAATAAAGTTTTGGCCTATCAAGA
TTTACATGGTAAAAAATTGACCTTGCGCAATATCGCTGTCGTATCCGAATGTAAAAATCCAGTGTTATTTATGGAAAACT
ATAAAAATTTGGATATCAAATCTTGTCGGGAAGAATTTAACAAGTTTCCTTCTTTTTCGATTTTGGATGACATCTATCCT
TTGGCGCTCAAACAGATTTACAATCCACCTGTACTTTTGTTTTATCAAGGGGATTTAGAATTGCTGGAAAAATCAAAGCT
GGCAGTTGTTGGTACACGAAATGCCAGTAAAAATGGTATCCAATCTGTTCAGAAAATTATCAAGGAACTAAATAATCGCT
TTGTTATTGTCAGTGGTTTGGCAAGGGGAATTGATACAGCTGCTCATATTGCTAGCCTGAAAAATGGTGGGCAAACCATT
GCCGTTATTGGAACAGGTTTGGATAAGATTTATCCAAAAGAAAATAAGGATTTGCAGACCTATATTGGAAAACACCATTT
GGTGCTGACAGAGTATGAAGCTGGTGCTCAGCCTCTCAAATACCATTTTCCAGAACGCAATCGCATTATAGCTGGTTTGG
TGGAAGGATTGGTAGTCTGCGAGGCAAAAATGCGGTCTGGCAGCTTGATTACTTGTGAACGTGCCTTGGAAGAAGGCAGA
GAAGTCTATGCTATTCCAGGTTCCATTATGGATGGGAAATCAGATGGATGTCATCATTTGATTCAAGAGGGAGCAAAGTG
CGTTACATCAGGATTGGACATCATTTCTGAGTATCAATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-60)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	69.643	100	0.696
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae D39	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae R6	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	64.286	100	0.643
dprA/cilB/dalA	Streptococcus mitis SK321	63.929	100	0.639
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	63.571	100	0.636
dprA	Lactococcus lactis subsp. cremoris KW2	60	100	0.6
dprA	Legionella pneumophila strain ERS1305867	41.7	88.214	0.368
dprA	Latilactobacillus sakei subsp. sakei 23K	40.964	88.929	0.364
dprA	Bacillus subtilis subsp. subtilis str. 168	50.746	71.786	0.364