Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   PJV85_RS04930 Genome accession   NZ_CP116457
Coordinates   997093..997281 (-) Length   62 a.a.
NCBI ID   WP_136275039.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1095     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 992093..1002281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJV85_RS04905 (PJV85_04905) - 993892..994263 (+) 372 WP_010922377.1 GntR family transcriptional regulator -
  PJV85_RS04910 (PJV85_04910) - 994263..994961 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  PJV85_RS04915 (PJV85_04915) - 994971..995756 (+) 786 WP_002984433.1 hypothetical protein -
  PJV85_RS04920 (PJV85_04920) - 995888..996502 (-) 615 WP_011285558.1 TVP38/TMEM64 family protein -
  PJV85_RS04930 (PJV85_04930) prx 997093..997281 (-) 189 WP_136275039.1 Paratox Regulator
  PJV85_RS04935 (PJV85_04935) speA 997502..998257 (+) 756 WP_009880239.1 streptococcal pyrogenic exotoxin SpeA -
  PJV85_RS04940 (PJV85_04940) - 998379..999038 (-) 660 WP_009880240.1 hypothetical protein -
  PJV85_RS04945 (PJV85_04945) - 999038..999259 (-) 222 WP_009880241.1 hypothetical protein -
  PJV85_RS04950 (PJV85_04950) - 999269..1000042 (-) 774 WP_011054795.1 hypothetical protein -
  PJV85_RS04955 (PJV85_04955) - 1000053..1000655 (-) 603 WP_011054796.1 hypothetical protein -
  PJV85_RS04960 (PJV85_04960) - 1000667..1001431 (-) 765 WP_011054797.1 CHAP domain-containing protein -
  PJV85_RS04965 (PJV85_04965) - 1001433..1001765 (-) 333 WP_011054798.1 phage holin -
  PJV85_RS04970 (PJV85_04970) - 1001765..1002088 (-) 324 WP_015055952.1 hypothetical protein -
  PJV85_RS04975 (PJV85_04975) - 1002102..1002224 (-) 123 WP_015055953.1 hypothetical protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7266.32 Da        Isoelectric Point: 4.1191

>NTDB_id=777443 PJV85_RS04930 WP_136275039.1 997093..997281(-) (prx) [Streptococcus pyogenes strain 1095]
MLYIDEFKEAIDKGYILGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=777443 PJV85_RS04930 WP_136275039.1 997093..997281(-) (prx) [Streptococcus pyogenes strain 1095]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAGGGGTATATTTTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

91.935

100

0.919
  prx Streptococcus pyogenes MGAS315

77.966

95.161

0.742
  prx Streptococcus pyogenes MGAS8232

79.31

93.548

0.742
  prx Streptococcus pyogenes MGAS315

77.586

93.548

0.726
  prx Streptococcus pyogenes MGAS315

72.881

95.161

0.694
  prx Streptococcus pyogenes MGAS315

88.095

67.742

0.597
  prx Streptococcus pyogenes MGAS315

78.049

66.129

0.516