Detailed information NTG0771712

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AVT_RS01535
• Genome accession: NZ_CP115303
• Coordinates: 289835..290416 (+)
• Length: 193 a.a.
• NCBI ID: WP_071725649.1
• Uniprot ID: -
• Organism: Bacillus tropicus strain JMT105-2
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 284835..295416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVT_RS01510 (AVT_01510)	-	285958..287325 (+)	1368	WP_087963949.1	lytic polysaccharide monooxygenase	-
AVT_RS01515 (AVT_01515)	-	287456..287890 (-)	435	WP_087963950.1	GNAT family N-acetyltransferase	-
AVT_RS01520 (AVT_01520)	rpiA	287997..288659 (-)	663	WP_131102364.1	ribose-5-phosphate isomerase RpiA	-
AVT_RS01525 (AVT_01525)	-	288664..288984 (-)	321	WP_029438605.1	2Fe-2S iron-sulfur cluster-binding protein	-
AVT_RS01530 (AVT_01530)	-	289127..289813 (+)	687	WP_270185092.1	RNA polymerase subunit sigma-70	-
AVT_RS01535 (AVT_01535)	clpP	289835..290416 (+)	582	WP_071725649.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
AVT_RS01540 (AVT_01540)	-	290463..291320 (-)	858	WP_071725648.1	glycine betaine ABC transporter substrate-binding protein	-
AVT_RS01545 (AVT_01545)	-	291492..292697 (+)	1206	WP_087963953.1	quaternary amine ABC transporter ATP-binding protein	-
AVT_RS01550 (AVT_01550)	-	292690..293526 (+)	837	WP_001084762.1	ABC transporter permease	-
AVT_RS01555 (AVT_01555)	-	293576..293812 (-)	237	WP_087963954.1	hypothetical protein	-
AVT_RS01560 (AVT_01560)	-	294030..294203 (+)	174	WP_142391882.1	septum formation initiator	-
AVT_RS01565 (AVT_01565)	-	294310..294795 (+)	486	WP_087963956.1	HIT family protein	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21134.41 Da
• Isoelectric Point: 5.3277

>NTDB_id=771712 AVT_RS01535 WP_071725649.1 289835..290416(+) (clpP) [Bacillus tropicus strain JMT105-2]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDGVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=771712 AVT_RS01535 WP_071725649.1 289835..290416(+) (clpP) [Bacillus tropicus strain JMT105-2]
ATGAATGCAATTCCATATGTTGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTGAAAGA
CCGTATTATTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCCGGCGGATCAACGACAGCGGGATTTGCTATATTAGATACA
ATGAATTTAATCAAACCTGATGTACAAACGCTATGCATGGGCTTTGCAGCATCATTTGGTGCATTGTTACTATTATCAGG
TGCAAAAGGAAAACGATTTGCACTCCCAAATAGTGAAATTATGATTCATCAGCCGCTAGGTGGCGCACAAGGGCAAGCAA
CAGAAATTGAAATAACAGCAAAAAGAATTTTAAAATTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
CCGATTGAAAGGGTAGCACATGATACAGAAAGAGATTATTTTATGACCGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGGTGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.196	97.927	0.658
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus pneumoniae R6	55.208	99.482	0.549
clpP	Streptococcus pneumoniae TIGR4	55.208	99.482	0.549
clpP	Streptococcus pneumoniae Rx1	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMG 18311	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMD-9	55.208	99.482	0.549
clpP	Streptococcus pneumoniae D39	55.208	99.482	0.549
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	52.381	97.927	0.513
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.265	97.927	0.492