Detailed information NTG0768531

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ORQ91_RS02655
• Genome accession: NZ_CP115172
• Coordinates: 539436..540833 (+)
• Length: 465 a.a.
• NCBI ID: WP_142927723.1
• Uniprot ID: -
• Organism: Bacillus safensis strain BS-10L
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 534436..545833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ORQ91_RS02635 (ORQ91_00532)	-	535439..536107 (-)	669	WP_012011434.1	YigZ family protein	-
ORQ91_RS02640 (ORQ91_00533)	degS	536328..537503 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
ORQ91_RS02645 (ORQ91_00534)	degU	537568..538257 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ORQ91_RS02650 (ORQ91_00535)	-	538473..539315 (+)	843	WP_024423625.1	DegV family protein	-
ORQ91_RS02655 (ORQ91_00536)	comFA	539436..540833 (+)	1398	WP_142927723.1	DEAD/DEAH box helicase	Machinery gene
ORQ91_RS02660 (ORQ91_00537)	-	540882..541175 (+)	294	WP_024423623.1	late competence development ComFB family protein	-
ORQ91_RS02665 (ORQ91_00538)	comFC	541202..541858 (+)	657	WP_258011096.1	ComF family protein	Machinery gene
ORQ91_RS02670 (ORQ91_00539)	-	541915..542334 (+)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
ORQ91_RS02675 (ORQ91_00540)	flgM	542414..542677 (+)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
ORQ91_RS02680 (ORQ91_00541)	-	542696..543178 (+)	483	WP_103131678.1	flagellar protein FlgN	-
ORQ91_RS02685 (ORQ91_00542)	flgK	543194..544714 (+)	1521	WP_122631681.1	flagellar hook-associated protein FlgK	-
ORQ91_RS02690 (ORQ91_00543)	flgL	544724..545632 (+)	909	WP_024423617.1	flagellar hook-associated protein FlgL	-

Sequence

Protein

• Length: 465 a.a.
• Molecular weight: 53208.16 Da
• Isoelectric Point: 10.0241

>NTDB_id=768531 ORQ91_RS02655 WP_142927723.1 539436..540833(+) (comFA) [Bacillus safensis strain BS-10L]
MNMDKAMELMRQLHSRHLLTVETKCPQSNLDWLEEKGLVNRSPAIERKANGFTCCRCGVSHKRYFAHSPCEVCQKGCVYC
RSCIMMGKAAECGFLYEWTGPQMVETCRAELTWQGELSKGQKRASERMIEAIKNKFDLLVWAVCGAGKTEVLFHGIEYAL
NQGMRVCIATPRTDVVLELEPRLRKAFQGVTITVLYGGSSQRFQITPLVITTTHQLMRYKNAFDVLIVDEVDAFPYSMDE
RLQFAVLKAMRKNRGVRIYLSATPSKKMTREVSRGKLEAIKIPLRFHEQPLPVPTFHWIGHWKKKLKKNQLPPKVMNWMQ
RHIANRRRILLFVPSIATMKKVTKILREQSLNVEGVSADDPDRKQKVQHFRDYVYDVLVTTTILERGVTIPNVQVGVLGS
ESTIFTESALVQISGRVGRHPDYCTGDVFLFHFGLTRSMKQAKKHIAKMNDTAAKEFSEKQCGFN

Nucleotide

• Length: 1398 bp

>NTDB_id=768531 ORQ91_RS02655 WP_142927723.1 539436..540833(+) (comFA) [Bacillus safensis strain BS-10L]
TTGAATATGGACAAAGCAATGGAACTAATGCGGCAGCTGCATTCACGCCATCTGCTCACCGTTGAAACAAAGTGCCCACA
GTCCAATTTAGATTGGCTGGAGGAGAAGGGCTTAGTCAATCGGTCTCCAGCCATTGAGAGGAAAGCAAATGGTTTTACAT
GCTGCCGGTGCGGTGTATCACACAAGCGGTATTTCGCTCATTCTCCATGTGAAGTGTGTCAAAAGGGTTGTGTGTACTGT
AGATCATGCATCATGATGGGAAAAGCAGCAGAATGTGGGTTTCTTTATGAATGGACAGGTCCACAAATGGTAGAAACATG
TCGAGCCGAATTAACATGGCAGGGAGAGCTGTCTAAAGGACAAAAAAGAGCGTCAGAAAGAATGATTGAAGCTATTAAAA
ACAAATTTGATCTACTTGTTTGGGCGGTTTGCGGAGCAGGGAAAACGGAAGTGCTTTTTCACGGAATCGAATATGCGTTA
AATCAAGGAATGAGGGTCTGTATTGCGACACCTAGAACAGATGTAGTGCTTGAACTCGAACCACGGCTTAGAAAAGCATT
TCAAGGGGTGACAATTACCGTACTTTACGGAGGCAGTTCTCAAAGGTTTCAAATAACACCGCTTGTGATCACCACAACCC
ACCAGCTGATGAGATACAAAAATGCTTTTGATGTGCTCATTGTAGATGAAGTCGATGCCTTCCCTTATTCAATGGATGAG
CGTCTCCAATTTGCTGTTCTAAAGGCGATGAGAAAGAACAGAGGGGTTAGGATTTATTTAAGTGCGACACCCTCTAAAAA
AATGACGAGAGAGGTTTCTCGTGGAAAACTGGAAGCGATAAAAATTCCTTTGCGTTTTCACGAGCAACCATTACCCGTAC
CGACCTTTCATTGGATCGGTCATTGGAAAAAGAAATTAAAAAAGAACCAGCTGCCCCCTAAAGTGATGAATTGGATGCAG
AGACATATTGCAAATAGGAGAAGAATATTACTTTTTGTTCCTTCAATTGCTACCATGAAGAAGGTAACGAAGATTCTTCG
AGAACAATCCTTAAATGTGGAGGGAGTATCTGCCGATGATCCGGATAGGAAACAAAAGGTTCAGCACTTTAGAGATTACG
TATACGATGTACTAGTTACAACCACTATTCTAGAAAGAGGCGTAACGATTCCAAATGTTCAAGTGGGGGTACTAGGTTCG
GAATCTACTATTTTTACAGAGAGTGCACTTGTTCAGATATCTGGACGGGTAGGCAGACACCCGGATTATTGTACAGGAGA
TGTTTTCCTTTTTCATTTTGGTTTAACGAGAAGTATGAAACAAGCAAAGAAGCATATCGCAAAAATGAATGATACGGCTG
CAAAAGAGTTTTCTGAAAAACAGTGTGGGTTCAACTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (116-265)

• Helicase conserved C-terminal domain (Helicase_C) (324-420)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.412	98.065	0.514
comFA/cflA	Streptococcus pneumoniae Rx1	38.497	94.409	0.363
comFA/cflA	Streptococcus pneumoniae D39	38.497	94.409	0.363
comFA/cflA	Streptococcus pneumoniae R6	38.497	94.409	0.363
comFA/cflA	Streptococcus pneumoniae TIGR4	38.269	94.409	0.361