Detailed information NTG0766833

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: O4M77_RS07635
• Genome accession: NZ_CP114606
• Coordinates: 1634687..1635883 (-)
• Length: 398 a.a.
• NCBI ID: WP_005235842.1
• Uniprot ID: -
• Organism: Acinetobacter sp. YWS30-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1629687..1640883

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O4M77_RS07620 (O4M77_07605)	-	1631700..1632728 (+)	1029	WP_313482804.1	AraC family transcriptional regulator	-
O4M77_RS07625 (O4M77_07610)	gcvH	1632811..1633185 (+)	375	WP_104426083.1	glycine cleavage system protein GcvH	-
O4M77_RS07630 (O4M77_07615)	-	1633438..1634613 (+)	1176	WP_323713277.1	MFS transporter	-
O4M77_RS07635 (O4M77_07620)	pilU	1634687..1635883 (-)	1197	WP_005235842.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
O4M77_RS07640 (O4M77_07625)	pilU	1636287..1637465 (-)	1179	WP_323713278.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
O4M77_RS07645 (O4M77_07630)	-	1637704..1638753 (-)	1050	WP_180011009.1	3-deoxy-7-phosphoheptulonate synthase	-
O4M77_RS07650 (O4M77_07635)	-	1639306..1639836 (-)	531	WP_312087321.1	hypothetical protein	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 44946.45 Da
• Isoelectric Point: 6.5072

>NTDB_id=766833 O4M77_RS07635 WP_005235842.1 1634687..1635883(-) (pilU) [Acinetobacter sp. YWS30-1]
MFTAELLDEAKKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQTLTAEKTKLFAYSLMNDKQRQEFEAELEC
NFAITVPGVSRFRVNVFVQQLQVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
SNNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTQDGKGRRAAIEIMLNTPLISDLILKGEFHELKAIMGKS
RELGMQTFDQALFDLYNEGAISYEEALRNADSTNELRLQIKLKSNRQDNPAAGEATQFTMMQEPKAEEKEQENTSASE

Nucleotide

• Length: 1197 bp

>NTDB_id=766833 O4M77_RS07635 WP_005235842.1 1634687..1635883(-) (pilU) [Acinetobacter sp. YWS30-1]
ATGTTCACGGCAGAACTGTTGGACGAAGCAAAAAAATTCATGCATCACATGCTGACCAAAGTAGTGGAATATGGGGGCTC
AGACTTATTTATTACCGCAGATTTTCCACCGAGTATTAAACATCAGGGCTTAATGAAGCCCTTTGGACAACAGACCTTAA
CTGCTGAAAAAACCAAACTGTTTGCTTATAGCTTGATGAATGACAAACAGCGTCAAGAGTTTGAAGCTGAACTGGAATGT
AACTTCGCGATTACCGTGCCGGGCGTATCGCGCTTCCGGGTAAATGTTTTCGTACAACAGCTTCAGGTCGGGATGGTAAT
CCGGACCATTACCGCAGAAATTCCAAATTTCCAGAAACTGAAATTACCAGAATCATTGAAACACGTGATTATGGAAAAAC
GCGGTCTGGTACTGGTTGTAGGAGGAACGGGTTCAGGTAAATCGACCTCTCTGGCAGCGATGATTGACTACCGCAATGAA
AATTCGGCGGGGCATATCATTACCGTGGAAGATCCGGTGGAATATGTACATAAACACAAGAAATCCATGATTACTCACCG
TGAAGTTGGAGTCGATTGCCATTCCTGGCACAATGCGCTGAAAAATACCTTGCGTCAGGCCCCCGATGTAATTCTGATCG
GTGAGATTCGGGATACCGAAACCATGGAACACGCAATTGCCTTTGCTGAAACCGGACATTTATGTCTGGGTACACTGCAT
TCCAATAATGCTAACCAGACTTTGGACCGGATTATTAACTTCTTCCCGGAAGAACGCCGTAATCAGTTATTAATGGATTT
ATCTTCGAATATGAAGGCGATTATTTCCCAGCGTCTGATTCGTACTCAGGATGGAAAAGGGCGTCGGGCTGCAATTGAAA
TCATGTTAAATACACCTTTGATTTCTGATCTGATTCTAAAAGGTGAGTTTCATGAGCTGAAGGCCATTATGGGCAAATCT
CGTGAACTGGGCATGCAGACTTTCGATCAGGCCTTATTTGACCTGTATAACGAGGGTGCGATTTCTTATGAGGAAGCATT
ACGTAATGCTGATTCGACTAATGAATTACGTTTACAGATCAAGCTGAAAAGCAACCGCCAGGATAATCCTGCTGCTGGAG
AAGCAACACAATTCACGATGATGCAAGAACCGAAAGCTGAAGAAAAAGAACAAGAAAATACTTCAGCATCTGAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (117-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	60.92	87.437	0.533
pilU	Acinetobacter baylyi ADP1	55.908	87.186	0.487
pilU	Vibrio cholerae strain A1552	51.781	91.709	0.475
pilT	Pseudomonas aeruginosa PAK	44.172	81.91	0.362
pilT	Acinetobacter nosocomialis M2	43.636	82.915	0.362
pilT	Acinetobacter baumannii D1279779	43.636	82.915	0.362
pilT	Acinetobacter baumannii strain A118	43.636	82.915	0.362