Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   OPT59_RS07545 Genome accession   NZ_CP125360
Coordinates   1520523..1520705 (-) Length   60 a.a.
NCBI ID   WP_283151476.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain UT_120444     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1515523..1525705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPT59_RS07525 (OPT59_07525) - 1515688..1515849 (-) 162 WP_283151538.1 hypothetical protein -
  OPT59_RS07530 (OPT59_07530) - 1515933..1517795 (-) 1863 WP_042357955.1 heavy metal translocating P-type ATPase -
  OPT59_RS07535 (OPT59_07535) - 1518011..1518883 (+) 873 WP_014612446.1 Rgg/GadR/MutR family transcriptional regulator -
  OPT59_RS07540 (OPT59_07540) - 1518950..1520140 (+) 1191 WP_015017210.1 MFS transporter -
  OPT59_RS07545 (OPT59_07545) prx 1520523..1520705 (-) 183 WP_283151476.1 Paratox Regulator
  OPT59_RS07550 (OPT59_07550) - 1520882..1521523 (-) 642 Protein_1434 CHAP domain-containing protein -
  OPT59_RS07555 (OPT59_07555) - 1521636..1522328 (-) 693 WP_159338707.1 AP2 domain-containing protein -
  OPT59_RS07560 (OPT59_07560) - 1522564..1523115 (-) 552 Protein_1436 glycoside hydrolase family 73 protein -
  OPT59_RS07565 (OPT59_07565) - 1523227..1523682 (-) 456 WP_165737658.1 phage holin family protein -
  OPT59_RS07570 (OPT59_07570) - 1523685..1524341 (-) 657 WP_283151477.1 hypothetical protein -
  OPT59_RS07575 (OPT59_07575) - 1524344..1524772 (-) 429 WP_012767015.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6893.87 Da        Isoelectric Point: 5.0210

>NTDB_id=762516 OPT59_RS07545 WP_283151476.1 1520523..1520705(-) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
MLTYDEFKQAIDHGYITGDTVAIVRKNGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=762516 OPT59_RS07545 WP_283151476.1 1520523..1520705(-) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
ATGCTAACATACGACGAATTTAAGCAAGCAATCGACCATGGGTATATCACAGGAGACACAGTAGCGATTGTGCGCAAAAA
CGGACAGATCTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

95

100

0.95
  prx Streptococcus pyogenes MGAS315

88.333

100

0.883
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

86.047

71.667

0.617
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

80.952

70

0.567