Detailed information NTG0075365

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: UKS_RS06825
• Genome accession: NZ_AP021887
• Coordinates: 1335344..1335934 (-)
• Length: 196 a.a.
• NCBI ID: WP_156012295.1
• Uniprot ID: -
• Organism: Streptococcus sp. 116-D4
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1330344..1340934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UKS_RS06800 (UKS_13030)	-	1331041..1331805 (-)	765	WP_049497484.1	ABC transporter ATP-binding protein	-
UKS_RS06805 (UKS_13040)	-	1331805..1332761 (-)	957	WP_049497482.1	branched-chain amino acid ABC transporter permease	-
UKS_RS06810 (UKS_13050)	-	1332765..1333634 (-)	870	WP_000941427.1	branched-chain amino acid ABC transporter permease	-
UKS_RS06815 (UKS_13060)	-	1333751..1334911 (-)	1161	WP_000726116.1	ABC transporter substrate-binding protein	-
UKS_RS06820 (UKS_13070)	-	1334978..1335265 (-)	288	WP_049497480.1	YlbG family protein	-
UKS_RS06825 (UKS_13080)	clpP	1335344..1335934 (-)	591	WP_156012295.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
UKS_RS06830 (UKS_13090)	upp	1336108..1336737 (-)	630	WP_000515974.1	uracil phosphoribosyltransferase	-
UKS_RS06835 (UKS_13100)	-	1336826..1337293 (-)	468	WP_156012296.1	cytidine/deoxycytidylate deaminase family protein	-
UKS_RS06840 (UKS_13110)	-	1337312..1337869 (-)	558	WP_156012297.1	TetR/AcrR family transcriptional regulator	-
UKS_RS06845 (UKS_13120)	-	1337994..1338839 (+)	846	WP_156012298.1	DegV family protein	-
UKS_RS06850 (UKS_13130)	-	1339093..1340265 (+)	1173	WP_156012299.1	NAD(P)/FAD-dependent oxidoreductase	-
UKS_RS06855 (UKS_13140)	-	1340314..1340835 (+)	522	WP_156012300.1	DUF1697 domain-containing protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21434.44 Da
• Isoelectric Point: 4.4829

>NTDB_id=75365 UKS_RS06825 WP_156012295.1 1335344..1335934(-) (clpP) [Streptococcus sp. 116-D4]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGK
TVEQIHADAERDYWMSAQETLEYGFIDEIMANNSLN

Nucleotide

• Length: 591 bp

>NTDB_id=75365 UKS_RS06825 WP_156012295.1 1335344..1335934(-) (clpP) [Streptococcus sp. 116-D4]
ATGATTCCAGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCATACGATATTTACTCACGTCTTCTCAAAGACCGCAT
CATTATGCTGACAGGTCAAGTTGAAGACAATATGGCTAACTCTGTTATTGCCCAATTGCTTTTCTTAGATGCCCAAGATA
GTACAAAAGATATTTATCTTTATGTCAATACACCTGGTGGTTCCGTTTCAGCTGGTTTGGCAATCGTTGATACCATGAAC
TTTATTAAGGCAGATGTCCAAACTATTGTTATGGGAATGGCTGCATCTATGGGGACAGTCATCGCATCAAGTGGAGCAAA
AGGCAAACGGTTCATGCTTCCAAATGCTGAATACATGATCCACCAACCAATGGGTGGTACAGGTGGTGGTACACAGCAGA
CAGATATGGCGATTGCTGCTGAACACTTGCTTAAAACTCGTAAGACTTTGGAGCAAATTCTTGCAGATAATTCTGGTAAA
ACAGTTGAGCAGATCCATGCAGATGCTGAACGTGATTACTGGATGAGCGCTCAAGAAACACTTGAATATGGCTTTATTGA
TGAAATTATGGCCAACAATTCATTGAACTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	94.898	100	0.949
clpP	Streptococcus pneumoniae D39	94.898	100	0.949
clpP	Streptococcus pneumoniae R6	94.898	100	0.949
clpP	Streptococcus pneumoniae TIGR4	94.898	100	0.949
clpP	Streptococcus pyogenes MGAS315	92.308	99.49	0.918
clpP	Streptococcus pyogenes JRS4	92.308	99.49	0.918
clpP	Streptococcus thermophilus LMD-9	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	90.769	99.49	0.903
clpP	Streptococcus mutans UA159	88.718	99.49	0.883
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.667	99.49	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	86.154	99.49	0.857
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571
clpP	Bacillus subtilis subsp. subtilis str. 168	57.292	97.959	0.561