Detailed information NTG0074411

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K5706_RS14300
• Genome accession: NZ_AP019849
• Coordinates: 3142676..3143785 (-)
• Length: 369 a.a.
• NCBI ID: WP_221068375.1
• Uniprot ID: -
• Organism: Vibrio alfacsensis strain 04Ya249
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3137676..3148785

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5706_RS14280 (VA249_26880)	-	3138629..3140431 (+)	1803	WP_221069708.1	hypothetical protein	-
K5706_RS14285 (VA249_26890)	-	3140412..3141431 (-)	1020	WP_221069706.1	hypothetical protein	-
K5706_RS14290 (VA249_26900)	-	3141602..3142171 (-)	570	WP_221068374.1	type I DNA topoisomerase	-
K5706_RS14295 (VA249_26910)	-	3142194..3142673 (-)	480	WP_275946046.1	DUF494 family protein	-
K5706_RS14300 (VA249_26920)	dprA	3142676..3143785 (-)	1110	WP_221068375.1	DNA-processing protein DprA	Machinery gene
K5706_RS14305 (VA249_26930)	-	3143769..3144857 (-)	1089	WP_221068376.1	LysM peptidoglycan-binding domain-containing protein	-
K5706_RS14310 (VA249_26940)	def	3144996..3145514 (+)	519	WP_221068377.1	peptide deformylase	-
K5706_RS14315 (VA249_26950)	fmt	3145546..3146493 (+)	948	WP_221070566.1	methionyl-tRNA formyltransferase	-
K5706_RS14320 (VA249_26960)	rsmB	3146576..3147859 (+)	1284	WP_221070568.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 39572.30 Da
• Isoelectric Point: 6.6060

>NTDB_id=74411 K5706_RS14300 WP_221068375.1 3142676..3143785(-) (dprA) [Vibrio alfacsensis strain 04Ya249]
MKIQNESDLAAWLKLTCLPGIGAVKLNKLLSKDSPSNIVQYSTSELQLLGFTDKQLQAWSMVDKEVDACLAWLASSSQHS
ILTLANPRYPPLLKQTVAPPPLLFVKGDASCLSLPQIAMVGSRNASVNGLQHARSFASELVQHDLIVTSGLALGIDGHAH
DGALQAGGKTIAVLGSGLEQVYPARHRSLAQRVIESGALVSEFRPEAKPRAENFPRRNRIISGLSLGVLVVEAAEKSGSL
ITARYALEQGREVFALPTSINAPNATGGNQLIRSGACLVQNTQEVLNEIQSLLNWSVSQSVDLFSTPMSEEELPFPQLFA
NVGNEATPVDILANRTNISVQEVMMQLLELELSGHVVAVSGGYIRKGRG

Nucleotide

• Length: 1110 bp

>NTDB_id=74411 K5706_RS14300 WP_221068375.1 3142676..3143785(-) (dprA) [Vibrio alfacsensis strain 04Ya249]
ATGAAAATACAAAATGAGAGTGACCTTGCTGCTTGGTTAAAACTAACGTGTTTACCGGGGATCGGCGCGGTAAAGCTGAA
TAAGTTGTTGAGTAAAGATTCGCCAAGCAATATCGTCCAGTATTCAACCTCTGAGCTGCAACTTTTAGGGTTTACCGACA
AGCAACTACAAGCGTGGTCTATGGTTGATAAAGAAGTGGATGCTTGTTTAGCTTGGTTAGCGTCATCTTCCCAGCATTCA
ATTCTTACCTTGGCTAACCCCCGGTATCCACCGCTATTAAAGCAAACGGTCGCTCCGCCTCCTTTGTTGTTTGTTAAAGG
TGATGCGAGCTGTTTATCCTTGCCACAAATCGCCATGGTTGGTAGTCGCAACGCCAGTGTGAATGGTTTGCAACATGCAC
GCAGTTTTGCTTCAGAACTCGTTCAGCATGATCTGATCGTGACCAGTGGATTGGCTTTAGGTATTGATGGTCATGCGCAT
GATGGAGCTTTGCAAGCCGGTGGTAAAACGATCGCAGTGCTAGGCTCAGGATTAGAGCAAGTGTATCCAGCAAGGCATCG
TAGTCTGGCGCAGCGGGTGATAGAAAGCGGTGCGTTAGTGTCGGAGTTTCGCCCGGAAGCAAAACCGAGAGCAGAAAACT
TTCCGCGTCGAAATCGAATTATAAGTGGCTTATCCTTAGGTGTTTTAGTTGTTGAAGCGGCAGAAAAAAGCGGCTCTTTG
ATAACGGCACGTTATGCCCTTGAGCAAGGGCGTGAAGTGTTTGCGTTGCCTACGTCAATCAATGCCCCGAATGCGACGGG
GGGTAATCAGTTGATTCGTAGTGGTGCCTGCCTCGTACAAAATACCCAAGAGGTGCTAAATGAAATACAATCTTTACTCA
ATTGGTCTGTTAGTCAGAGTGTAGATTTGTTTTCTACGCCAATGAGTGAAGAAGAATTGCCATTTCCTCAGCTGTTCGCT
AACGTAGGAAATGAGGCTACACCAGTTGATATTCTTGCAAACAGGACCAATATATCTGTCCAAGAAGTCATGATGCAGCT
CTTAGAGCTTGAGCTTTCAGGGCATGTTGTTGCAGTATCCGGTGGCTATATTCGAAAGGGGAGGGGCTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (316-362)

• DNA recombination-mediator protein A (DNA_processg_A) (77-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio campbellii strain DS40M4	87.263	100	0.873
dprA	Vibrio cholerae strain A1552	57.297	100	0.575
dprA	Glaesserella parasuis strain SC1401	48.8	100	0.496
dprA	Legionella pneumophila strain ERS1305867	44.321	97.832	0.434
dprA	Haemophilus influenzae Rd KW20	44.51	91.328	0.407
dprA	Neisseria meningitidis strain C311	35.19	100	0.377
dprA	Neisseria meningitidis MC58	35.19	100	0.377
dprA	Acinetobacter baylyi ADP1	39.583	91.057	0.36