Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QAY87_RS31975 Genome accession   NZ_CP121766
Coordinates   6808404..6808811 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain 22112     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6803404..6813811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY87_RS31945 (QAY87_31930) - 6803452..6804456 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  QAY87_RS31950 (QAY87_31935) pyrR 6804480..6804992 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  QAY87_RS31955 (QAY87_31940) ruvX 6805104..6805538 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  QAY87_RS31960 (QAY87_31945) - 6805538..6806107 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  QAY87_RS31965 (QAY87_31950) - 6806156..6807049 (-) 894 WP_003084580.1 TonB family protein -
  QAY87_RS31970 (QAY87_31955) gshB 6807196..6808149 (-) 954 WP_023435373.1 glutathione synthase -
  QAY87_RS31975 (QAY87_31960) pilG 6808404..6808811 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  QAY87_RS31980 (QAY87_31965) pilH 6808858..6809223 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  QAY87_RS31985 (QAY87_31970) - 6809274..6809810 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  QAY87_RS31990 (QAY87_31975) pilJ 6809895..6811943 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  QAY87_RS31995 (QAY87_31980) pilK 6812004..6812879 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=738722 QAY87_RS31975 WP_003084583.1 6808404..6808811(+) (pilG) [Pseudomonas aeruginosa strain 22112]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=738722 QAY87_RS31975 WP_003084583.1 6808404..6808811(+) (pilG) [Pseudomonas aeruginosa strain 22112]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGTTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385