Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   P8R99_RS08950 Genome accession   NZ_CP121160
Coordinates   1689579..1689737 (-) Length   52 a.a.
NCBI ID   WP_226316669.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain S5     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1684579..1694737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R99_RS08945 - 1688865..1689545 (+) 681 WP_278043276.1 IS6-like element IS1216 family transposase -
  P8R99_RS08950 prx 1689579..1689737 (-) 159 WP_226316669.1 Paratox Regulator
  P8R99_RS08955 - 1690040..1690957 (-) 918 WP_000197048.1 L-lactate dehydrogenase -
  P8R99_RS08960 rpmB 1691196..1691384 (+) 189 WP_001140949.1 50S ribosomal protein L28 -
  P8R99_RS08965 - 1691516..1691881 (+) 366 WP_000216445.1 Asp23/Gls24 family envelope stress response protein -
  P8R99_RS08970 - 1691881..1693545 (+) 1665 WP_000036700.1 DAK2 domain-containing protein -
  P8R99_RS08975 - 1693693..1694577 (+) 885 WP_000052520.1 SPFH domain-containing protein -

Sequence

Protein


Download         Length: 52 a.a.        Molecular weight: 6062.98 Da        Isoelectric Point: 4.7185

>NTDB_id=736257 P8R99_RS08950 WP_226316669.1 1689579..1689737(-) (prx) [Streptococcus agalactiae strain S5]
MLFYEEFKEAIDRGFVETEYVKVVRRDGKLVDYVLEGEPVKPHEIVGSVAKF

Nucleotide


Download         Length: 159 bp        

>NTDB_id=736257 P8R99_RS08950 WP_226316669.1 1689579..1689737(-) (prx) [Streptococcus agalactiae strain S5]
ATGTTATTTTATGAAGAATTTAAAGAAGCAATCGATAGAGGATTTGTTGAGACAGAATATGTCAAGGTTGTAAGACGTGA
CGGAAAGTTAGTCGATTATGTTCTAGAGGGTGAACCCGTTAAGCCGCATGAAATTGTAGGTTCTGTTGCAAAGTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

52.174

88.462

0.462
  prx Streptococcus pyogenes MGAS315

52.174

88.462

0.462
  prx Streptococcus pyogenes MGAS315

50

88.462

0.442
  prx Streptococcus pyogenes MGAS315

51.163

82.692

0.423
  prx Streptococcus pyogenes MGAS315

51.22

78.846

0.404
  prx Streptococcus pyogenes MGAS315

45.652

88.462

0.404
  prx Streptococcus pyogenes MGAS315

47.727

84.615

0.404