Detailed information NTG0724791

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: NYR47_RS14095
• Genome accession: NZ_CP103777
• Coordinates: 2745692..2746273 (-)
• Length: 193 a.a.
• NCBI ID: WP_000991620.1
• Uniprot ID: A0A9W5QUF9
• Organism: Bacillus toyonensis strain DC11
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2740692..2751273

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR47_RS14065	-	2741308..2741793 (-)	486	WP_098144842.1	HIT family protein	-
NYR47_RS14070	-	2741909..2742085 (-)	177	WP_142950864.1	septum formation initiator	-
NYR47_RS14075	-	2742297..2742534 (+)	238	Protein_2700	hypothetical protein	-
NYR47_RS14080	-	2742584..2743420 (-)	837	WP_001084772.1	proline/glycine betaine ABC transporter permease	-
NYR47_RS14085	-	2743413..2744618 (-)	1206	WP_000370604.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
NYR47_RS14090	-	2744790..2745647 (+)	858	WP_001227651.1	glycine betaine ABC transporter substrate-binding protein	-
NYR47_RS14095	clpP	2745692..2746273 (-)	582	WP_000991620.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
NYR47_RS14100	-	2746295..2746981 (-)	687	WP_259415634.1	RNA polymerase subunit sigma-70	-
NYR47_RS14105	-	2747125..2747445 (+)	321	WP_001125383.1	2Fe-2S iron-sulfur cluster-binding protein	-
NYR47_RS14110	rpiA	2747450..2748112 (+)	663	WP_259417764.1	ribose-5-phosphate isomerase RpiA	-
NYR47_RS14115	-	2748227..2748661 (+)	435	WP_259415635.1	GNAT family N-acetyltransferase	-
NYR47_RS14120	exsF	2749314..2749817 (+)	504	WP_000953228.1	exosporium protein ExsF	-
NYR47_RS14125	-	2750114..2750197 (+)	84	Protein_2710	exosporium protein D	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21266.48 Da
• Isoelectric Point: 4.9174

>NTDB_id=724791 NYR47_RS14095 WP_000991620.1 2745692..2746273(-) (clpP) [Bacillus toyonensis strain DC11]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=724791 NYR47_RS14095 WP_000991620.1 2745692..2746273(-) (clpP) [Bacillus toyonensis strain DC11]
ATGAATGCAATTCCATATGTAGTAGAGCAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGAATTATTATTATCGGTTCAGAAATTAACGATCAAGTAGCGAGTAGTGTTGTAGCTCAATTATTATTTCTAGAAGCGG
AAGATGCAGAGAAAGATATATATTTATACATTAATAGCCCAGGCGGATCAACGACAGCAGGTTTTGCAATATTAGATACA
ATGAACTTAATTAAACCAGACGTGCAAACACTTTGTATGGGATTTGCAGCATCATTTGGTGCGTTGTTACTTTTATCAGG
TGCAAAAGGAAAACGATTTGCATTGCCTAACAGTGAAATTATGATTCATCAACCGCTTGGTGGTGCGCAAGGGCAAGCAA
CTGAAATCGAAATAACAGCAAAAAGAATTTTAAAGCTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
CCGATTGAAAGGGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	69.11	98.964	0.684
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.254	97.927	0.668
clpP	Streptococcus thermophilus LMD-9	56.25	99.482	0.56
clpP	Streptococcus pneumoniae Rx1	56.25	99.482	0.56
clpP	Streptococcus pneumoniae D39	56.25	99.482	0.56
clpP	Streptococcus pneumoniae TIGR4	56.25	99.482	0.56
clpP	Streptococcus pneumoniae R6	56.25	99.482	0.56
clpP	Streptococcus thermophilus LMG 18311	56.25	99.482	0.56
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus mutans UA159	54.497	97.927	0.534
clpP	Lactococcus lactis subsp. cremoris KW2	53.439	97.927	0.523
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.323	97.927	0.503