Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   PVK51_RS03515 Genome accession   NZ_CP118310
Coordinates   644026..644208 (+) Length   60 a.a.
NCBI ID   WP_228636946.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 20154051     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 639026..649208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVK51_RS03485 (PVK51_03450) - 639415..640032 (+) 618 WP_032462176.1 DUF1366 domain-containing protein -
  PVK51_RS03490 (PVK51_03455) - 640042..640314 (+) 273 WP_002986916.1 hypothetical protein -
  PVK51_RS03495 (PVK51_03460) - 640311..640538 (+) 228 WP_000609113.1 phage holin -
  PVK51_RS03500 (PVK51_03465) - 640654..641856 (+) 1203 WP_011184057.1 glucosaminidase domain-containing protein -
  PVK51_RS03505 (PVK51_03470) - 642178..642693 (+) 516 WP_023077389.1 hypothetical protein -
  PVK51_RS03510 (PVK51_03475) - 642807..643793 (-) 987 WP_011106647.1 DNA/RNA non-specific endonuclease -
  PVK51_RS03515 (PVK51_03480) prx 644026..644208 (+) 183 WP_228636946.1 Paratox Regulator
  PVK51_RS03520 (PVK51_03485) uvrA 644422..647250 (+) 2829 WP_021340890.1 excinuclease ABC subunit UvrA Machinery gene
  PVK51_RS03525 (PVK51_03490) - 647366..648439 (+) 1074 WP_002988490.1 Xaa-Pro peptidase family protein -
  PVK51_RS03530 (PVK51_03495) - 648474..648935 (+) 462 WP_002988493.1 deaminase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6897.83 Da        Isoelectric Point: 4.2542

>NTDB_id=722009 PVK51_RS03515 WP_228636946.1 644026..644208(+) (prx) [Streptococcus pyogenes strain 20154051]
MLTYDEFKQAIDHGYITGDTVAIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=722009 PVK51_RS03515 WP_228636946.1 644026..644208(+) (prx) [Streptococcus pyogenes strain 20154051]
ATGCTAACATACGACGAATTTAAGCAAGCAATCGACCATGGGTATATCACAGGAGACACAGTAGCGATTGTGCGCAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

86.047

71.667

0.617