Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   PVK55_RS03010 Genome accession   NZ_CP118309
Coordinates   573597..573779 (+) Length   60 a.a.
NCBI ID   WP_002986897.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 20192362     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 568597..578779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVK55_RS02990 (PVK55_02955) - 569738..570262 (+) 525 WP_011017840.1 Panacea domain-containing protein -
  PVK55_RS02995 (PVK55_02960) - 570250..571116 (+) 867 WP_011054729.1 DUF334 domain-containing protein -
  PVK55_RS03000 (PVK55_02965) spek 571421..572200 (+) 780 WP_011054728.1 streptococcal pyrogenic exotoxin SpeK -
  PVK55_RS03005 (PVK55_02970) - 572676..573251 (+) 576 WP_011054727.1 hypothetical protein -
  PVK55_RS03010 (PVK55_02980) prx 573597..573779 (+) 183 WP_002986897.1 hypothetical protein Regulator
  PVK55_RS03015 (PVK55_02985) - 574024..574764 (+) 741 WP_002983781.1 response regulator -
  PVK55_RS03020 (PVK55_02990) - 574761..576494 (+) 1734 WP_002989050.1 sensor histidine kinase -
  PVK55_RS03025 (PVK55_02995) - 576567..577646 (+) 1080 WP_346393461.1 MmcQ/YjbR family DNA-binding protein -
  PVK55_RS03030 (PVK55_03000) - 577669..578385 (+) 717 WP_002989054.1 B3/4 domain-containing protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6772.68 Da        Isoelectric Point: 3.9286

>NTDB_id=721911 PVK55_RS03010 WP_002986897.1 573597..573779(+) (prx) [Streptococcus pyogenes strain 20192362]
MLTYDEFKQAIDDGYIVGDTVAIVRKNGQIFDYVLPGEKVRPSEVVAEEIVEEVVVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=721911 PVK55_RS03010 WP_002986897.1 573597..573779(+) (prx) [Streptococcus pyogenes strain 20192362]
ATGCTAACATACGACGAGTTTAAGCAAGCAATCGATGACGGATATATCGTAGGAGACACAGTAGCGATTGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGCGAAAAAGTCAGACCGTCGGAGGTTGTGGCTGAGGAAATAGTGGAAGAGG
TGGTGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983

  prx Streptococcus pyogenes MGAS315

81.667

100

0.817

  prx Streptococcus pyogenes MGAS8232

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567