Detailed information NTG0718716

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: NWE22_RS09500
• Genome accession: NZ_CP102747
• Coordinates: 1873841..1874275 (-)
• Length: 144 a.a.
• NCBI ID: WP_277745464.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SFJ45
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1868841..1879275

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NWE22_RS09475 (NWE22_09475)	-	1869036..1870292 (-)	1257	WP_277745460.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
NWE22_RS09480 (NWE22_09480)	-	1870347..1870898 (-)	552	WP_216806342.1	folate family ECF transporter S component	-
NWE22_RS09485 (NWE22_09485)	-	1871153..1872340 (-)	1188	WP_277745461.1	acetate kinase	-
NWE22_RS09490 (NWE22_09490)	comYH	1872390..1873343 (-)	954	WP_277745462.1	class I SAM-dependent methyltransferase	Machinery gene
NWE22_RS09495 (NWE22_09495)	comGG	1873363..1873863 (-)	501	WP_277745463.1	competence type IV pilus minor pilin ComGG	-
NWE22_RS09500 (NWE22_09500)	comYF	1873841..1874275 (-)	435	WP_277745464.1	competence type IV pilus minor pilin ComGF	Machinery gene
NWE22_RS09505 (NWE22_09505)	comGE	1874262..1874555 (-)	294	WP_105126461.1	competence type IV pilus minor pilin ComGE	-
NWE22_RS09510 (NWE22_09510)	comGD	1874527..1874931 (-)	405	WP_160864045.1	competence type IV pilus minor pilin ComGD	-
NWE22_RS09515 (NWE22_09515)	comYC	1874921..1875199 (-)	279	WP_277745465.1	competence type IV pilus major pilin ComGC	Machinery gene
NWE22_RS09520 (NWE22_09520)	comYB	1875201..1876238 (-)	1038	WP_171989705.1	competence type IV pilus assembly protein ComGB	Machinery gene
NWE22_RS09525 (NWE22_09525)	comYA	1876150..1877100 (-)	951	WP_277745466.1	competence type IV pilus ATPase ComGA	Machinery gene
NWE22_RS09530 (NWE22_09530)	-	1877188..1878138 (+)	951	WP_216806334.1	S66 peptidase family protein	-
NWE22_RS09535 (NWE22_09535)	-	1878171..1878539 (-)	369	WP_171989702.1	DUF1033 family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16422.80 Da
• Isoelectric Point: 7.1334

>NTDB_id=718716 NWE22_RS09500 WP_277745464.1 1873841..1874275(-) (comYF) [Streptococcus parasuis strain SFJ45]
MRKTKLAAFTLLECLIALLIISGSLLVIEGLSKLIAHEVRYQERHVEKQWLLFCDQLRAEWEGASLDRVDSGKLYLTKGE
KSLAFGKSVADDFRKTNANGQGYQPMLYKVYSATYAQQGEVIQLDVTFESGEERSFRYAFEKTN

Nucleotide

• Length: 435 bp

>NTDB_id=718716 NWE22_RS09500 WP_277745464.1 1873841..1874275(-) (comYF) [Streptococcus parasuis strain SFJ45]
TTGAGAAAAACTAAGTTAGCCGCGTTCACCCTCTTGGAATGTTTAATTGCCTTACTCATAATTTCTGGCAGCTTGCTTGT
GATTGAAGGTTTATCAAAATTGATAGCGCATGAGGTTCGCTATCAAGAGCGTCATGTGGAAAAACAGTGGTTACTATTTT
GTGATCAATTGCGGGCTGAATGGGAAGGAGCAAGTCTTGATCGGGTTGATTCTGGAAAGTTGTACCTAACCAAAGGGGAA
AAATCATTGGCATTTGGCAAGTCTGTGGCAGATGATTTTCGCAAGACAAATGCAAATGGTCAGGGCTATCAGCCCATGTT
GTACAAAGTTTATTCAGCTACTTACGCCCAACAAGGCGAGGTTATACAGCTGGATGTAACATTTGAAAGTGGGGAGGAAA
GGAGTTTTAGGTATGCTTTTGAAAAGACGAATTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (39-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA159	54.861	100	0.549
comYF	Streptococcus mutans UA140	54.861	100	0.549
comGF	Lactococcus lactis subsp. cremoris KW2	48.227	97.917	0.472
comGF/cglF	Streptococcus mitis NCTC 12261	47.143	97.222	0.458
comGF/cglF	Streptococcus pneumoniae Rx1	45.652	95.833	0.437
comGF/cglF	Streptococcus pneumoniae D39	45.652	95.833	0.437
comGF/cglF	Streptococcus pneumoniae R6	45.652	95.833	0.437
comGF/cglF	Streptococcus pneumoniae TIGR4	45.652	95.833	0.437
comGF/cglF	Streptococcus mitis SK321	44.604	96.528	0.431