Detailed information NTG0718703

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: NWE22_RS07050
• Genome accession: NZ_CP102747
• Coordinates: 1380885..1381475 (-)
• Length: 196 a.a.
• NCBI ID: WP_171989735.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SFJ45
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1375885..1386475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NWE22_RS07025 (NWE22_07025)	-	1376265..1377029 (-)	765	WP_171989730.1	ABC transporter ATP-binding protein	-
NWE22_RS07030 (NWE22_07030)	-	1377029..1377976 (-)	948	WP_171989731.1	branched-chain amino acid ABC transporter permease	-
NWE22_RS07035 (NWE22_07035)	-	1377979..1378866 (-)	888	WP_171989732.1	branched-chain amino acid ABC transporter permease	-
NWE22_RS07040 (NWE22_07040)	-	1379147..1380316 (-)	1170	WP_277745279.1	ABC transporter substrate-binding protein	-
NWE22_RS07045 (NWE22_07045)	-	1380481..1380768 (-)	288	WP_174845760.1	DUF2129 domain-containing protein	-
NWE22_RS07050 (NWE22_07050)	clpP	1380885..1381475 (-)	591	WP_171989735.1	ATP-dependent Clp protease proteolytic subunit	Regulator
NWE22_RS07055 (NWE22_07055)	upp	1381597..1382226 (-)	630	WP_024391947.1	uracil phosphoribosyltransferase	-
NWE22_RS07060 (NWE22_07060)	-	1382306..1383880 (-)	1575	WP_277745740.1	alpha-glucosidase	-
NWE22_RS07065 (NWE22_07065)	-	1383994..1384158 (-)	165	WP_277745280.1	hypothetical protein	-
NWE22_RS07070 (NWE22_07070)	-	1384263..1385102 (+)	840	WP_239604046.1	AraC family transcriptional regulator	-
NWE22_RS07075 (NWE22_07075)	-	1385133..1386293 (-)	1161	WP_277745281.1	MalY/PatB family protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21588.79 Da
• Isoelectric Point: 5.7110

>NTDB_id=718703 NWE22_RS07050 WP_171989735.1 1380885..1381475(-) (clpP) [Streptococcus parasuis strain SFJ45]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGTAASMGTIIASSGTKGKRFMLPNAEYLIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKILADNSGK
TVKQIHKDAERDYWMSAEETLAYGFIDQIMYDTKTK

Nucleotide

• Length: 591 bp

>NTDB_id=718703 NWE22_RS07050 WP_171989735.1 1380885..1381475(-) (clpP) [Streptococcus parasuis strain SFJ45]
ATGATTCCAGTAGTTATTGAACAAACTAGTCGCGGTGAGCGCTCGTATGATATTTATTCACGTTTGCTGAAAGACCGCAT
CATTATGTTGACAGGTCAGGTTGAGGACAATATGGCCAATTCGATTATTGCCCAATTGCTTTTCCTAGATGCACAAGATC
CAACAAAAGATATTTATCTCTATGTAAATACACCAGGGGGTTCTGTTTCTGCAGGTCTTGCCATCGTGGATACAATGAAC
TTCATTAAAGCAGACGTACAGACAATTGTAATGGGTACTGCAGCAAGTATGGGAACAATCATTGCTTCAAGTGGTACAAA
AGGCAAACGTTTCATGCTTCCTAATGCAGAATACCTGATTCACCAACCAATGGGAGGCACTGGTGGTGGTACTCAGCAAA
CTGACATGGCAATTGCAGCAGAACACCTCTTAAAAACTCGTAACAAGTTAGAAAAAATCTTGGCGGACAATTCTGGTAAG
ACAGTCAAACAAATCCATAAGGATGCAGAACGTGACTATTGGATGTCTGCTGAAGAAACCTTGGCATACGGCTTTATCGA
CCAAATTATGTACGATACGAAGACTAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-190)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	91.327	100	0.913
clpP	Streptococcus pyogenes JRS4	91.327	100	0.913
clpP	Streptococcus mutans UA159	89.286	100	0.893
clpP	Streptococcus thermophilus LMD-9	87.755	100	0.878
clpP	Streptococcus thermophilus LMG 18311	87.755	100	0.878
clpP	Streptococcus pneumoniae Rx1	89.474	96.939	0.867
clpP	Streptococcus pneumoniae D39	89.474	96.939	0.867
clpP	Streptococcus pneumoniae R6	89.474	96.939	0.867
clpP	Streptococcus pneumoniae TIGR4	89.474	96.939	0.867
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	84.184	100	0.842
clpP	Lactococcus lactis subsp. cremoris KW2	83.673	100	0.837
clpP	Bacillus subtilis subsp. subtilis str. 168	57.653	100	0.577
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.421	96.939	0.566