Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   MOP79_RS02260 Genome accession   NZ_CP102583
Coordinates   438632..439282 (-) Length   216 a.a.
NCBI ID   WP_000387330.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain D39Mega17545     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 433632..444282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOP79_RS02240 - 434237..435418 (-) 1182 WP_000655958.1 ABC transporter permease -
  MOP79_RS02245 - 435422..436009 (-) 588 Protein_448 ATP-binding cassette domain-containing protein -
  MOP79_RS02250 - 436041..436229 (-) 189 WP_010976492.1 hypothetical protein -
  MOP79_RS02255 comEC/celB 436408..438648 (-) 2241 WP_000942407.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MOP79_RS02260 comEA/celA/cilE 438632..439282 (-) 651 WP_000387330.1 ComEA family DNA-binding protein Machinery gene
  MOP79_RS02265 - 439350..439919 (-) 570 WP_000443899.1 GNAT family N-acetyltransferase -
  MOP79_RS02270 ald 440096..441207 (+) 1112 Protein_453 alanine dehydrogenase -
  MOP79_RS02275 - 441508..441834 (-) 327 Protein_454 TfoX/Sxy family protein -
  MOP79_RS02280 - 441837..442337 (-) 501 WP_000566988.1 GNAT family N-acetyltransferase -
  MOP79_RS02285 - 442530..443498 (-) 969 WP_000658183.1 PhoH family protein -
  MOP79_RS02290 - 443584..443799 (-) 216 WP_001232082.1 YozE family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 23229.65 Da        Isoelectric Point: 5.5171

>NTDB_id=717844 MOP79_RS02260 WP_000387330.1 438632..439282(-) (comEA/celA/cilE) [Streptococcus pneumoniae strain D39Mega17545]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGLGTASSISKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=717844 MOP79_RS02260 WP_000387330.1 438632..439282(-) (comEA/celA/cilE) [Streptococcus pneumoniae strain D39Mega17545]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAACCAGCTCCACAAACACCTGTCAAAGAGACGAATTTGCAGGCTGAAGTCGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAAAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGCCAACAGACTGGTTTGGGGACAGCTTCTTCAATAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGGCAAAACAATAGAAAAGCTTAAAGACTATGTTA
CAGTGGATTAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(151-214)

SLBB domain (SLBB)

(76-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.