Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   MGCS35957_RS08260 Genome accession   NZ_CP117288
Coordinates   1665706..1665888 (-) Length   60 a.a.
NCBI ID   WP_143935176.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGCS35957     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1660706..1670888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGCS35957_RS08250 (MGCS35957_03382) - 1661833..1664058 (-) 2226 WP_084916396.1 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein -
  MGCS35957_RS08255 (MGCS35957_03384) rlmD 1664142..1665515 (-) 1374 WP_003062482.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  MGCS35957_RS08260 (MGCS35957_03386) prx 1665706..1665888 (-) 183 WP_143935176.1 Paratox Regulator
  MGCS35957_RS08265 (MGCS35957_03388) - 1666052..1666186 (+) 135 WP_260664903.1 hypothetical protein -
  MGCS35957_RS08270 (MGCS35957_03390) - 1666325..1666516 (+) 192 WP_111679034.1 XRE family transcriptional regulator -
  MGCS35957_RS08275 (MGCS35957_03392) - 1666587..1666895 (+) 309 WP_111679033.1 hypothetical protein -
  MGCS35957_RS08280 (MGCS35957_03394) - 1666930..1667403 (+) 474 WP_111679032.1 hypothetical protein -
  MGCS35957_RS08285 (MGCS35957_03396) - 1667405..1667761 (+) 357 WP_111679031.1 hypothetical protein -
  MGCS35957_RS08290 (MGCS35957_03398) acrIIA3 1667888..1668262 (+) 375 WP_012767357.1 anti-CRISPR protein AcrIIA3 -
  MGCS35957_RS08295 (MGCS35957_03400) - 1668262..1668864 (+) 603 WP_143935175.1 AP2 domain-containing protein -
  MGCS35957_RS08300 (MGCS35957_03402) - 1668866..1669081 (+) 216 WP_023611751.1 hypothetical protein -
  MGCS35957_RS08305 (MGCS35957_03404) - 1669150..1669389 (+) 240 WP_003055855.1 hypothetical protein -
  MGCS35957_RS08310 (MGCS35957_03406) - 1669699..1670280 (-) 582 WP_143935253.1 hypothetical protein -
  MGCS35957_RS08315 (MGCS35957_03408) - 1670277..1670447 (-) 171 WP_155782710.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6861.80 Da        Isoelectric Point: 4.5164

>NTDB_id=717739 MGCS35957_RS08260 WP_143935176.1 1665706..1665888(-) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35957]
MLTHDEFKQAVDRGYITGHTVAIVRKNGQIFDYVLPNEKVKNGEVVTDEKVEVVLMELDE

Nucleotide


Download         Length: 183 bp        

>NTDB_id=717739 MGCS35957_RS08260 WP_143935176.1 1665706..1665888(-) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35957]
ATGCTAACACACGACGAATTTAAACAGGCAGTCGACCGTGGATATATCACAGGACACACAGTGGCGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGCTGCCGAATGAGAAAGTAAAGAATGGAGAAGTTGTGACAGACGAAAAAGTGGAAGTAG
TGTTGATGGAATTAGATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

84.483

96.667

0.817
  prx Streptococcus pyogenes MGAS8232

82.759

96.667

0.8
  prx Streptococcus pyogenes MGAS315

81.356

98.333

0.8
  prx Streptococcus pyogenes MGAS315

66.667

100

0.667
  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567
  prx Streptococcus pyogenes MGAS315

76.744

71.667

0.55
  prx Streptococcus pyogenes MGAS315

73.81

70

0.517