Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | NRZ29_RS17390 | Genome accession | NZ_CP102370 |
| Coordinates | 3800466..3800786 (+) | Length | 106 a.a. |
| NCBI ID | WP_076362890.1 | Uniprot ID | - |
| Organism | Aeromonas hydrophila strain BC19 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3795466..3805786
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRZ29_RS17365 (NRZ29_17360) | trhA | 3796104..3796739 (-) | 636 | WP_268029525.1 | PAQR family membrane homeostasis protein TrhA | - |
| NRZ29_RS17370 (NRZ29_17365) | - | 3796964..3798469 (+) | 1506 | WP_268029526.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| NRZ29_RS17375 (NRZ29_17370) | - | 3798574..3799125 (+) | 552 | WP_268029527.1 | septation protein A | - |
| NRZ29_RS17380 (NRZ29_17375) | - | 3799151..3799447 (+) | 297 | WP_268029528.1 | YciI family protein | - |
| NRZ29_RS17385 (NRZ29_17380) | cysQ | 3799528..3800298 (-) | 771 | WP_207138666.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| NRZ29_RS17390 (NRZ29_17385) | comEA | 3800466..3800786 (+) | 321 | WP_076362890.1 | ComEA family DNA-binding protein | Machinery gene |
| NRZ29_RS17395 (NRZ29_17390) | galU | 3800881..3801792 (+) | 912 | WP_017410998.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| NRZ29_RS17400 (NRZ29_17395) | - | 3802006..3803403 (+) | 1398 | WP_168968699.1 | peptide MFS transporter | - |
| NRZ29_RS17405 (NRZ29_17400) | - | 3803476..3804447 (-) | 972 | WP_268029529.1 | response regulator | - |
| NRZ29_RS17410 (NRZ29_17405) | - | 3804786..3805469 (+) | 684 | WP_202012737.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11217.05 Da Isoelectric Point: 9.5773
>NTDB_id=716591 NRZ29_RS17390 WP_076362890.1 3800466..3800786(+) (comEA) [Aeromonas hydrophila strain BC19]
MNYKTLTATLLLSCLPLFSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLFSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=716591 NRZ29_RS17390 WP_076362890.1 3800466..3800786(+) (comEA) [Aeromonas hydrophila strain BC19]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCTAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGTATCGGACCCGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTCAGCCAGCCTCTGCTGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCTAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGTATCGGACCCGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
52.727 |
100 |
0.547 |
| comEA | Vibrio cholerae strain A1552 |
52.727 |
100 |
0.547 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.535 |
95.283 |
0.443 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.959 |
92.453 |
0.443 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |
| comEA | Legionella pneumophila str. Paris |
38.235 |
96.226 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
38.235 |
96.226 |
0.368 |